RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 SMARCC2Q8TAQ2 1214 aa19.66■□□□□ 0.74
COMMD3-210ENST00000472610 COPS5Q92905 334 aa19.66■□□□□ 0.74
COMMD3-210ENST00000472610 BADQ92934 168 aa19.66■□□□□ 0.74
COMMD3-210ENST00000472610 STAM2O75886 525 aa19.65■□□□□ 0.74
COMMD3-210ENST00000472610 MYL3P08590 195 aa19.65■□□□□ 0.74
COMMD3-210ENST00000472610 PURAQ00577 322 aaKnown RBP19.65■□□□□ 0.74
COMMD3-210ENST00000472610 LY6KQ17RY6 165 aa19.65■□□□□ 0.74
COMMD3-210ENST00000472610 Q6ZUG5 572 aa19.65■□□□□ 0.74
COMMD3-210ENST00000472610 FAM126BQ8IXS8 530 aa19.65■□□□□ 0.74
COMMD3-210ENST00000472610 MTG1Q9BT17 334 aaPredicted RBP19.65■□□□□ 0.74
COMMD3-210ENST00000472610 DDX41Q9UJV9 622 aaKnown RBP19.65■□□□□ 0.74
COMMD3-210ENST00000472610 MRVI1Q9Y6F6 885 aa19.65■□□□□ 0.74
COMMD3-210ENST00000472610 CCDC196A0A1B0GTZ2 297 aa19.64■□□□□ 0.73
COMMD3-210ENST00000472610 GOLGA8AA7E2F4 631 aa19.64■□□□□ 0.73
COMMD3-210ENST00000472610 GOLGA8BA8MQT2 603 aa19.64■□□□□ 0.73
COMMD3-210ENST00000472610 TGFB3P10600 412 aa19.64■□□□□ 0.73
COMMD3-210ENST00000472610 RPS6KB1P23443 525 aa19.64■□□□□ 0.73
COMMD3-210ENST00000472610 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
COMMD3-210ENST00000472610 PSTPIP2Q9H939 334 aa19.64■□□□□ 0.73
COMMD3-210ENST00000472610 GRIN2DO15399 1336 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 FRMPD4Q14CM0 1322 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 MEIS2O14770 477 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 TIMP1P01033 207 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 CD4P01730 458 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 CPA1P15085 419 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 CASTP20810 708 aaKnown RBP19.63■□□□□ 0.73
COMMD3-210ENST00000472610 ARHGAP1Q07960 439 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 LAMC2Q13753 1193 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 LRIT3Q3SXY7 679 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 BRF1Q92994 677 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 EMID1Q96A84 441 aaPredicted RBP19.63■□□□□ 0.73
COMMD3-210ENST00000472610 AGXT2Q9BYV1 514 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 TBX21Q9UL17 535 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 NAP1L2Q9ULW6 460 aaPredicted RBP19.63■□□□□ 0.73
COMMD3-210ENST00000472610 MYH7BA7E2Y1 1941 aa19.63■□□□□ 0.73
COMMD3-210ENST00000472610 CNTNAP5Q8WYK1 1306 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 hCG_1984214I3L0E3 225 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 PSMC6P62333 389 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 APOBRQ0VD83 1088 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 GNPTABQ3T906 1256 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 XRRA1Q6P2D8 792 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 USP17L6PQ6QN14 398 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 TEX2Q8IWB9 1127 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 DHX37Q8IY37 1157 aaKnown RBP19.62■□□□□ 0.73
COMMD3-210ENST00000472610 ZNF713Q8N859 430 aaPredicted RBP19.62■□□□□ 0.73
COMMD3-210ENST00000472610 IL31RAQ8NI17 732 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 PCDH10Q9P2E7 1040 aa19.62■□□□□ 0.73
COMMD3-210ENST00000472610 hCG_1642624A0A1W2PR95 340 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 EIF5BO60841 1220 aaKnown RBP19.61■□□□□ 0.73
COMMD3-210ENST00000472610 RGS20O76081 388 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 SUPT20HL2P0C7V6 817 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 ITGB8P26012 769 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 METAP2P50579 478 aaKnown RBP eCLIP19.61■□□□□ 0.73
COMMD3-210ENST00000472610 FUT2Q10981 343 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 RUFY3Q7L099 469 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 HEATR3Q7Z4Q2 680 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 AFG1LQ8WV93 481 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 TM6SF1Q9BZW5 370 aa19.61■□□□□ 0.73
COMMD3-210ENST00000472610 FAM217BQ9NTX9 383 aaPredicted RBP19.61■□□□□ 0.73
COMMD3-210ENST00000472610 V9GY48 417 aaPredicted RBP19.61■□□□□ 0.73
COMMD3-210ENST00000472610 MMP3P08254 477 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 CDC27P30260 824 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 FPGSQ05932 587 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 PTPN11Q06124 597 aaPredicted RBP19.6■□□□□ 0.73
COMMD3-210ENST00000472610 DGKDQ16760 1214 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 PCNX4Q63HM2 1172 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 MFSD5Q6N075 450 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 PPP1R18Q6NYC8 613 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 ZSWIM6Q9HCJ5 1215 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 SCN10AQ9Y5Y9 1956 aa19.6■□□□□ 0.73
COMMD3-210ENST00000472610 ICAM3P32942 547 aa19.59■□□□□ 0.73
COMMD3-210ENST00000472610 MRPS9P82933 396 aaKnown RBP19.59■□□□□ 0.73
COMMD3-210ENST00000472610 NBPF20Q3BBV1 942 aa19.59■□□□□ 0.73
COMMD3-210ENST00000472610 CELF3Q5SZQ8 465 aaKnown RBP19.59■□□□□ 0.73
COMMD3-210ENST00000472610 MYSM1Q5VVJ2 828 aa19.59■□□□□ 0.73
COMMD3-210ENST00000472610 NFRKBQ6P4R8 1299 aa19.59■□□□□ 0.73
COMMD3-210ENST00000472610 TMEM199Q8N511 208 aa19.59■□□□□ 0.73
COMMD3-210ENST00000472610 PPTC7Q8NI37 304 aa19.59■□□□□ 0.73
COMMD3-210ENST00000472610 GPKOWQ92917 476 aaPredicted RBP eCLIP19.59■□□□□ 0.73
COMMD3-210ENST00000472610 INPP4AQ96PE3 977 aaPredicted RBP19.59■□□□□ 0.73
COMMD3-210ENST00000472610 ALDH8A1Q9H2A2 487 aaPredicted RBP19.59■□□□□ 0.73
COMMD3-210ENST00000472610 NID2Q14112 1375 aa19.58■□□□□ 0.73
COMMD3-210ENST00000472610 SPDYE3A6NKU9 549 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 B4GALT4O60513 344 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 ADD1P35611 737 aaKnown RBP19.58■□□□□ 0.72
COMMD3-210ENST00000472610 NAPAP54920 295 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 EVCP57679 992 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 SHHQ15465 462 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 WWC2Q6AWC2 1192 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 GPR153Q6NV75 609 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 GLT8D2Q9H1C3 349 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 TRPV6Q9H1D0 765 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 EHMT1Q9H9B1 1298 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 MLXIPQ9HAP2 919 aa19.58■□□□□ 0.72
COMMD3-210ENST00000472610 SPATA31C2B4DYI2 1134 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 SOX1O00570 391 aaPredicted RBP19.57■□□□□ 0.72
COMMD3-210ENST00000472610 FIBPO43427 364 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 PPFIA4O75335 1185 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 GGPS1O95749 300 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms