RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 RFC2P35250 354 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 QRICH1Q2TAL8 776 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 ARHGEF16Q5VV41 709 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 C7orf31Q8N865 590 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 PIBF1Q8WXW3 757 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 GPKOWQ92917 476 aaPredicted RBP eCLIP11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 HLA-CQ95604 372 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 RMDN3Q96TC7 470 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 OSBPL7Q9BZF2 842 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 BCAS3Q9H6U6 928 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 TCP11L1Q9NUJ3 509 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 PTPRSQ13332 1948 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 ZNF213O14771 459 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 KPNA6O60684 536 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 SNHG28P0DPA3 235 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 CKBP12277 381 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 SDSP20132 328 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 HOXA13P31271 388 aaPredicted RBP11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 RRP1P56182 461 aaKnown RBP11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 MFSD10Q14728 455 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 EP400NLQ6ZTU2 488 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 PHOSPHO2Q8TCD6 241 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 C17orf80Q9BSJ5 609 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 LRFN3Q9BTN0 628 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 JMJD4Q9H9V9 463 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 SUGCTQ9HAC7 445 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 MRVI1Q9Y6F6 885 aa11.81□□□□□ -0.52
SCAMP3-205ENST00000472397 SELPP16109 830 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 CASTP20810 708 aaKnown RBP11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 MBTPS1Q14703 1052 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 STXBP2Q15833 593 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 KIAA0753Q2KHM9 967 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 AAK1Q2M2I8 961 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 FBXO11Q86XK2 927 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 HOMER1Q86YM7 354 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 DHX37Q8IY37 1157 aaKnown RBP11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 DNERQ8NFT8 737 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 IL31RAQ8NI17 732 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 ESR2Q92731 530 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 TTC14Q96N46 770 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 DDX41Q9UJV9 622 aaKnown RBP11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 TELO2Q9Y4R8 837 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 SUPT16HQ9Y5B9 1047 aaKnown RBP11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 COL4A4P53420 1690 aaPredicted RBP11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 ABCB11O95342 1321 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 MUC3AQ02505 3323 aa11.8□□□□□ -0.52
SCAMP3-205ENST00000472397 TANC1Q9C0D5 1861 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 LINC01553A4QN01 128 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 UPP2O95045 317 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 NR3C2P08235 984 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 CTSHP09668 335 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 PLA2G5P39877 138 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 PTPN11Q06124 597 aaPredicted RBP11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 CNKSR3Q6P9H4 555 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 FCHSD1Q86WN1 690 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 MYOCDQ8IZQ8 938 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 CCDC155Q8N6L0 562 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 NSUN6Q8TEA1 469 aaKnown RBP11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 AFAP1L1Q8TED9 768 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 PXMP2Q9NR77 195 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 ZSWIM5Q9P217 1185 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
SCAMP3-205ENST00000472397 B4DLN1 442 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 OPLAHO14841 1288 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 IL9P15248 144 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 KCNA5P22460 613 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 THPOP40225 353 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 SP2Q02086 613 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 SP4Q02446 784 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 DGKDQ16760 1214 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 TRIM71Q2Q1W2 868 aaKnown RBP11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 HSDL1Q3SXM5 330 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 GPATCH4Q5T3I0 446 aaKnown RBP11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 CYB5R4Q7L1T6 521 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 DBF4BQ8NFT6 615 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 SPATA33Q96N06 139 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 IL25Q9H293 177 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 BDP1A6H8Y1 2624 aa11.78□□□□□ -0.52
SCAMP3-205ENST00000472397 LOC102724159A0A0B4J2E5 919 aa11.77□□□□□ -0.53
SCAMP3-205ENST00000472397 H3BQ06 376 aaPredicted RBP11.77□□□□□ -0.53
SCAMP3-205ENST00000472397 RGS20O76081 388 aa11.77□□□□□ -0.53
SCAMP3-205ENST00000472397 BAIAP3O94812 1187 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms