RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 TRIM71Q2Q1W2 868 aaKnown RBP23.25■■□□□ 1.31
CCDC78-208ENST00000471861 LEXMQ3ZCV2 418 aa23.25■■□□□ 1.31
CCDC78-208ENST00000471861 USH1GQ495M9 461 aa23.25■■□□□ 1.31
CCDC78-208ENST00000471861 TBC1D5Q92609 795 aa23.25■■□□□ 1.31
CCDC78-208ENST00000471861 CPVLQ9H3G5 476 aa23.25■■□□□ 1.31
CCDC78-208ENST00000471861 HDAC6Q9UBN7 1215 aa23.25■■□□□ 1.31
CCDC78-208ENST00000471861 PNMA2Q9UL42 364 aa23.25■■□□□ 1.31
CCDC78-208ENST00000471861 ABHD14A-ACY1A0A1B0GW23 586 aa23.24■■□□□ 1.31
CCDC78-208ENST00000471861 GH1P01241 217 aa23.24■■□□□ 1.31
CCDC78-208ENST00000471861 IL9P15248 144 aa23.24■■□□□ 1.31
CCDC78-208ENST00000471861 SEPT14Q6ZU15 432 aa23.24■■□□□ 1.31
CCDC78-208ENST00000471861 PRR33A8MZF0 331 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 FGAP02671 866 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 MX1P20591 662 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 KCNA5P22460 613 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 MKRN4PQ13434 485 aaPredicted RBP23.23■■□□□ 1.31
CCDC78-208ENST00000471861 FAM117BQ6P1L5 589 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 CHST3Q7LGC8 479 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 GJD3Q8N144 294 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 RGS22Q8NE09 1264 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 TAAR1Q96RJ0 339 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 C17orf80Q9BSJ5 609 aa23.23■■□□□ 1.31
CCDC78-208ENST00000471861 KIAA1217Q5T5P2 1943 aa23.22■■□□□ 1.31
CCDC78-208ENST00000471861 PARNO95453 639 aaKnown RBP23.22■■□□□ 1.31
CCDC78-208ENST00000471861 GOLGA8HP0CJ92 632 aa23.22■■□□□ 1.31
CCDC78-208ENST00000471861 SYTL5Q8TDW5 730 aaPredicted RBP23.22■■□□□ 1.31
CCDC78-208ENST00000471861 B4DLN1 442 aa23.21■■□□□ 1.31
CCDC78-208ENST00000471861 HAS3O00219 553 aa23.21■■□□□ 1.31
CCDC78-208ENST00000471861 F2P00734 622 aa23.21■■□□□ 1.31
CCDC78-208ENST00000471861 PSEN2P49810 448 aa23.21■■□□□ 1.31
CCDC78-208ENST00000471861 MRPL12P52815 198 aaKnown RBP23.21■■□□□ 1.31
CCDC78-208ENST00000471861 ZNF200P98182 395 aaPredicted RBP23.21■■□□□ 1.31
CCDC78-208ENST00000471861 HIC1Q14526 733 aa23.21■■□□□ 1.31
CCDC78-208ENST00000471861 ZNF618Q5T7W0 954 aa23.21■■□□□ 1.31
CCDC78-208ENST00000471861 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.21■■□□□ 1.31
CCDC78-208ENST00000471861 ALYREFQ86V81 257 aaKnown RBP23.21■■□□□ 1.31
CCDC78-208ENST00000471861 A0A0D9SFI3 127 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 ZNF286BP0CG31 522 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 CASTP20810 708 aaKnown RBP23.2■■□□□ 1.3
CCDC78-208ENST00000471861 HAND2P61296 217 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 PTK7Q13308 1070 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 EMID1Q96A84 441 aaPredicted RBP23.2■■□□□ 1.3
CCDC78-208ENST00000471861 FAM227BQ96M60 508 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 ALG1Q9BT22 464 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 UBA5Q9GZZ9 404 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 DDX41Q9UJV9 622 aaKnown RBP23.2■■□□□ 1.3
CCDC78-208ENST00000471861 PCDHB15Q9Y5E8 787 aa23.2■■□□□ 1.3
CCDC78-208ENST00000471861 ZMYM6O95789 1325 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 IKBKEQ14164 716 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 MFSD10Q14728 455 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 CDC37Q16543 378 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-208ENST00000471861 DGKDQ16760 1214 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 PTCRAQ6ISU1 281 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-208ENST00000471861 ZNF589Q86UQ0 364 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-208ENST00000471861 TBC1D10CQ8IV04 446 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 C7orf31Q8N865 590 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 FBXO22Q8NEZ5 403 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 HELLSQ9NRZ9 838 aa23.19■■□□□ 1.3
CCDC78-208ENST00000471861 MICAL3Q7RTP6 2002 aa23.18■■□□□ 1.3
CCDC78-208ENST00000471861 EFCAB14O75071 495 aa23.18■■□□□ 1.3
CCDC78-208ENST00000471861 HTRA4P83105 476 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-208ENST00000471861 KIAA0753Q2KHM9 967 aa23.18■■□□□ 1.3
CCDC78-208ENST00000471861 GPATCH4Q5T3I0 446 aaKnown RBP23.18■■□□□ 1.3
CCDC78-208ENST00000471861 NEK9Q8TD19 979 aa23.18■■□□□ 1.3
CCDC78-208ENST00000471861 SP7Q8TDD2 431 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-208ENST00000471861 NSUN6Q8TEA1 469 aaKnown RBP23.18■■□□□ 1.3
CCDC78-208ENST00000471861 TTC14Q96N46 770 aa23.18■■□□□ 1.3
CCDC78-208ENST00000471861 NEDD4P46934 1319 aa23.17■■□□□ 1.3
CCDC78-208ENST00000471861 GRXCR2A6NFK2 248 aa23.17■■□□□ 1.3
CCDC78-208ENST00000471861 LGR5O75473 907 aa23.17■■□□□ 1.3
CCDC78-208ENST00000471861 HSPD1P10809 573 aaKnown RBP23.17■■□□□ 1.3
CCDC78-208ENST00000471861 SSTR3P32745 418 aaPredicted RBP23.17■■□□□ 1.3
CCDC78-208ENST00000471861 STXBP2Q15833 593 aa23.17■■□□□ 1.3
CCDC78-208ENST00000471861 RMDN3Q96TC7 470 aa23.17■■□□□ 1.3
CCDC78-208ENST00000471861 KATNAL1Q9BW62 490 aa23.17■■□□□ 1.3
CCDC78-208ENST00000471861 INSL6Q9Y581 213 aa23.17■■□□□ 1.3
CCDC78-208ENST00000471861 ABCB11O95342 1321 aa23.16■■□□□ 1.3
CCDC78-208ENST00000471861 H3BQ06 376 aaPredicted RBP23.16■■□□□ 1.3
CCDC78-208ENST00000471861 HOXD8P13378 290 aaPredicted RBP23.16■■□□□ 1.3
CCDC78-208ENST00000471861 EIF2AK2P19525 551 aaKnown RBP23.16■■□□□ 1.3
CCDC78-208ENST00000471861 PPTC7Q8NI37 304 aa23.16■■□□□ 1.3
CCDC78-208ENST00000471861 EVI5LQ96CN4 794 aa23.16■■□□□ 1.3
CCDC78-208ENST00000471861 MRPL38Q96DV4 380 aaKnown RBP23.16■■□□□ 1.3
CCDC78-208ENST00000471861 IWS1Q96ST2 819 aa23.16■■□□□ 1.3
CCDC78-208ENST00000471861 CRBNQ96SW2 442 aa23.16■■□□□ 1.3
CCDC78-208ENST00000471861 ZKSCAN3Q9BRR0 538 aa23.16■■□□□ 1.3
CCDC78-208ENST00000471861 MAF1Q9H063 256 aa23.16■■□□□ 1.3
CCDC78-208ENST00000471861 WDFY4Q6ZS81 3184 aa23.15■■□□□ 1.3
CCDC78-208ENST00000471861 MYOCDQ8IZQ8 938 aa23.15■■□□□ 1.3
CCDC78-208ENST00000471861 DBF4BQ8NFT6 615 aa23.15■■□□□ 1.3
CCDC78-208ENST00000471861 COL4A6Q14031 1691 aa23.14■■□□□ 1.29
CCDC78-208ENST00000471861 RGS20O76081 388 aa23.14■■□□□ 1.29
CCDC78-208ENST00000471861 MCMDC2Q4G0Z9 681 aa23.14■■□□□ 1.29
CCDC78-208ENST00000471861 EPC2Q52LR7 807 aa23.14■■□□□ 1.29
CCDC78-208ENST00000471861 ADGRF4Q8IZF3 695 aa23.14■■□□□ 1.29
CCDC78-208ENST00000471861 OSBPL7Q9BZF2 842 aa23.14■■□□□ 1.29
CCDC78-208ENST00000471861 MRVI1Q9Y6F6 885 aa23.14■■□□□ 1.29
CCDC78-208ENST00000471861 OPLAHO14841 1288 aa23.13■■□□□ 1.29
CCDC78-208ENST00000471861 COL19A1Q14993 1142 aa23.13■■□□□ 1.29
CCDC78-208ENST00000471861 QRICH1Q2TAL8 776 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms