RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 SSU72Q9NP77 194 aaKnown RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 PRDM5Q9NQX1 630 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-207ENST00000471697 SLC45A1Q9Y2W3 748 aa4.01□□□□□ -1.77
SCN3A-207ENST00000471697 TTC36A6NLP5 189 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 VSTM5A8MXK1 200 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 C9IYK1 514 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 GJB6O95452 261 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 HSP90AB1P08238 724 aaKnown RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 FAM153BP0C7A2 387 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 GPSM2P81274 684 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 DDX10Q13206 875 aaKnown RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 CBX2Q14781 532 aaPredicted RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 RNF219Q5W0B1 726 aaPredicted RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 C16orf54Q6UWD8 224 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 CCDC81Q6ZN84 652 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 ARMCX6Q7L4S7 300 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 ZBTB46Q86UZ6 589 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 STK35Q8TDR2 534 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 JPH3Q8WXH2 748 aaPredicted RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 GJA10Q969M2 543 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 KIF2CQ99661 725 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 YIPF4Q9BSR8 244 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 ZC3H12CQ9C0D7 883 aaKnown RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 CCDC8Q9H0W5 538 aaPredicted RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 SLC6A17Q9H1V8 727 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 SP110Q9HB58 689 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 PLCB1Q9NQ66 1216 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 CWC25Q9NXE8 425 aaPredicted RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 UBP1Q9NZI7 540 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 SLAMF8Q9P0V8 285 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 EVLQ9UI08 416 aaPredicted RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 TMEM59LQ9UK28 342 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 CNOT11Q9UKZ1 510 aaKnown RBP4□□□□□ -1.77
SCN3A-207ENST00000471697 ST14Q9Y5Y6 855 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 ROBO2Q9HCK4 1378 aa4□□□□□ -1.77
SCN3A-207ENST00000471697 WASHC2AQ641Q2 1341 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 ZC3H12DA2A288 527 aaKnown RBP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 FIBPO43427 364 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 PGRP06401 933 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 CT47B1P0C2W7 299 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 TGFB3P10600 412 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 GSTT1P30711 240 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 NTF4P34130 210 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 ERVFC1P60507 584 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 ITKQ08881 620 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 GBX1Q14549 363 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 SSPNQ14714 243 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 SAFBQ15424 915 aaKnown RBP eCLIP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 FNDC3BQ53EP0 1204 aaKnown RBP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 FAM133BQ5BKY9 247 aaKnown RBP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 DTHD1Q6ZMT9 781 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 PDZD3Q86UT5 571 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 PHC3Q8NDX5 983 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 WDR66Q8TBY9 1149 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 TIFAQ96CG3 184 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 SCLT1Q96NL6 688 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 RNF32Q9H0A6 362 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 PUS7LQ9H0K6 701 aaKnown RBP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 ZNF552Q9H707 407 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-207ENST00000471697 FBRSQ9HAH7 460 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 TCF7L1Q9HCS4 588 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 HDAC9Q9UKV0 1011 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 PPT2Q9UMR5 302 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 TRAK1Q9UPV9 953 aa3.99□□□□□ -1.77
SCN3A-207ENST00000471697 TNKSO95271 1327 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 A0A1W2PRQ8 180 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 FAM155AB1AL88 458 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 F6X3S4 739 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 hCG_1984214I3L0E3 225 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 GOLIM4O00461 696 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 APAF1O14727 1248 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 PLD2O14939 933 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 GPR39O43194 453 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 NBNO60934 754 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 NPTXRO95502 500 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 PF4P02776 101 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 RPN1P04843 607 aaKnown RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 SCP2P22307 547 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 CRKP46108 304 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 RENBPP51606 427 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 GTF2A2P52657 109 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 GJA9P57773 515 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 LMNB2Q03252 620 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 CHAF1AQ13111 956 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 TCIRG1Q13488 830 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 CCDC85BQ15834 202 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 PPP2R5EQ16537 467 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 MINDY4Q4G0A6 757 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 COBLL1Q53SF7 1204 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 WDR45BQ5MNZ6 344 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 JAKMIP3Q5VZ66 844 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 LARP1BQ659C4 914 aaKnown RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 CYB5RLQ6IPT4 315 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 MZT2BQ6NZ67 158 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 MPRIPQ6WCQ1 1025 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 LHFPL2Q6ZUX7 228 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 SV2BQ7L1I2 683 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 RASSF3Q86WH2 238 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 SP8Q8IXZ3 490 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms