RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ACTN4O43707 911 aaKnown RBP9.35□□□□□ -0.91
CD47-204ENST00000471694 EPHX2P34913 555 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 ARHGAP15Q53QZ3 475 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 SDCCAG8Q86SQ7 713 aaPredicted RBP9.35□□□□□ -0.91
CD47-204ENST00000471694 NLRP10Q86W26 655 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 GLYCTKQ8IVS8 523 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 BEST2Q8NFU1 509 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 PCIF1Q9H4Z3 704 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 HUS1O60921 280 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 CIB2O75838 187 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 SURF1Q15526 300 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 OR6B2Q6IFH4 312 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 RHPN2Q8IUC4 686 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 OPA1O60313 960 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 IFNB1P01574 187 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 IVLP07476 585 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 ARL4AP40617 200 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 CASP2P42575 452 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 GTF2A2P52657 109 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 MECOMQ03112 1051 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 RAPH1Q70E73 1250 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 MAP7D3Q8IWC1 876 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 SYCE1Q8N0S2 351 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 ANKS4BQ8N8V4 417 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 STAMQ92783 540 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 DYNLL2Q96FJ2 89 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 MSTO1Q9BUK6 570 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 TRIM31Q9BZY9 425 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 PLCB1Q9NQ66 1216 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 SMYD2Q9NRG4 433 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 RNF146Q9NTX7 359 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 RSPH10B2B2RC85 870 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 I3L4J1 428 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 DYNC1LI2O43237 492 aaPredicted RBP9.35□□□□□ -0.91
CD47-204ENST00000471694 ESRRBO95718 433 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 RSPH10BP0C881 870 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 ABCB4P21439 1286 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 HMGCS2P54868 508 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 SZRD1Q7Z422 152 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 PUS3Q9BZE2 481 aaKnown RBP9.35□□□□□ -0.91
CD47-204ENST00000471694 PTK2Q05397 1052 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 NEDD9Q14511 834 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 DENND2CQ68D51 928 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 CNGA4Q8IV77 575 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 YME1L1Q96TA2 773 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 ZNF302Q9NR11 478 aa9.35□□□□□ -0.91
CD47-204ENST00000471694 MED23Q9ULK4 1368 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 KRT3P12035 628 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 GMPSP49915 693 aaPredicted RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 SH3KBP1Q96B97 665 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 PIGSQ96S52 555 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 NUP58Q9BVL2 599 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 AKR1B15C9JRZ8 316 aaPredicted RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 KCNQ2O43526 872 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 CD58P19256 250 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 GARSP41250 739 aaKnown RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 STAT1P42224 750 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 MFAP3P55082 362 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 KRT40Q6A162 431 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 CLEC4GQ6UXB4 293 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 TRIML1Q8N9V2 468 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 MCUQ8NE86 351 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 WDR48Q8TAF3 677 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 ACAD9Q9H845 621 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 SLC13A4Q9UKG4 626 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 MTMR1Q13613 665 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 THOC5Q13769 683 aaKnown RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 SKAP1Q86WV1 359 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 TRIM17Q9Y577 477 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 PZPP20742 1482 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 MEIS1O00470 390 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 NVLO15381 856 aaKnown RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 ASMTLO95671 621 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 PRAMEF18Q5VWM3 479 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 GBP6Q6ZN66 633 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 PGBD4Q96DM1 585 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 DSCC1Q9BVC3 393 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 RBSNQ9H1K0 784 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 GOLGA8SH3BPF8 625 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 PPFIA4O75335 1185 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 IGHDP01880 384 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 PCP11498 1178 aaKnown RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 VEGFAP15692 232 aaPredicted RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 TRIM14Q14142 442 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 KIAA1755Q5JYT7 1200 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 GTF3C2Q8WUA4 911 aaPredicted RBP9.34□□□□□ -0.91
CD47-204ENST00000471694 NT5C1BQ96P26 610 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 DCTPP1Q9H773 170 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 MSRAQ9UJ68 235 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 MAD1L1Q9Y6D9 718 aa9.34□□□□□ -0.91
CD47-204ENST00000471694 NSFP46459 744 aaKnown RBP9.33□□□□□ -0.92
CD47-204ENST00000471694 CDK8P49336 464 aa9.33□□□□□ -0.92
CD47-204ENST00000471694 CYP27A1Q02318 531 aa9.33□□□□□ -0.92
CD47-204ENST00000471694 MTMR2Q13614 643 aa9.33□□□□□ -0.92
CD47-204ENST00000471694 SETDB1Q15047 1291 aa9.33□□□□□ -0.92
CD47-204ENST00000471694 NSUN6Q8TEA1 469 aaKnown RBP9.33□□□□□ -0.92
CD47-204ENST00000471694 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms