RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 NAPBQ9H115 298 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 NSUN3Q9H649 340 aaKnown RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 EPB41L4AQ9HCS5 686 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 HDAC6Q9UBN7 1215 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 SIP14410 1827 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 BRWD1Q9NSI6 2320 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 TMEM221A6NGB7 291 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 A6NJR5 290 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 M0R296 226 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 KDM4AO75164 1064 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 LGR5O75473 907 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 ARIH2O95376 493 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 GH1P01241 217 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 MMP3P08254 477 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 CTSHP09668 335 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 CASTP20810 708 aaKnown RBP8.11□□□□□ -1.11
HDAC1-204ENST00000471488 PSEN2P49810 448 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 NDUFV1P49821 464 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 CTDSPL2Q05D32 466 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 GPNMBQ14956 572 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 DGKDQ16760 1214 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 RRP12Q5JTH9 1297 aaKnown RBP8.11□□□□□ -1.11
HDAC1-204ENST00000471488 SYDE2Q5VT97 1194 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 ZBTB33Q86T24 672 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 TMEM192Q8IY95 271 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 IFNL3Q8IZI9 196 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 DBF4BQ8NFT6 615 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 APPBP2Q92624 585 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 IFIH1Q9BYX4 1025 aaKnown RBP8.11□□□□□ -1.11
HDAC1-204ENST00000471488 INCENPQ9NQS7 918 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 PRKAG3Q9UGI9 489 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 GTF2IRD1Q9UHL9 959 aa8.11□□□□□ -1.11
HDAC1-204ENST00000471488 GREB1LQ9C091 1923 aaPredicted RBP8.11□□□□□ -1.11
HDAC1-204ENST00000471488 MYH7P12883 1935 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 RBM47A0AV96 593 aaKnown RBP8.1□□□□□ -1.11
HDAC1-204ENST00000471488 RSPH10B2B2RC85 870 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 PATL2C9JE40 543 aaKnown RBP8.1□□□□□ -1.11
HDAC1-204ENST00000471488 H3BNC9 293 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 RNF113AO15541 343 aaKnown RBP8.1□□□□□ -1.11
HDAC1-204ENST00000471488 RAB11FIP3O75154 756 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 PARNO95453 639 aaKnown RBP8.1□□□□□ -1.11
HDAC1-204ENST00000471488 RSPH10BP0C881 870 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 GNAT2P19087 354 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC1-204ENST00000471488 RPS6P62753 249 aaKnown RBP8.1□□□□□ -1.11
HDAC1-204ENST00000471488 DLX2Q07687 328 aaPredicted RBP8.1□□□□□ -1.11
HDAC1-204ENST00000471488 PPARAQ07869 468 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 MFSD10Q14728 455 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 KIAA0753Q2KHM9 967 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 FBXO11Q86XK2 927 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 MORC4Q8TE76 937 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 EDAQ92838 391 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 WNT8BQ93098 351 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 GPATCH3Q96I76 525 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 SYNPO2Q9UMS6 1093 aa8.1□□□□□ -1.11
HDAC1-204ENST00000471488 H0Y858 1186 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 LINC01565O15544 149 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 MBTPS2O43462 519 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 DHX16O60231 1041 aaKnown RBP8.09□□□□□ -1.11
HDAC1-204ENST00000471488 CXCL10P02778 98 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 SP100P23497 879 aaPredicted RBP8.09□□□□□ -1.11
HDAC1-204ENST00000471488 HYAL1Q12794 435 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 PTK7Q13308 1070 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 HERC4Q5GLZ8 1057 aaPredicted RBP8.09□□□□□ -1.11
HDAC1-204ENST00000471488 PPP4R3BQ5MIZ7 849 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 TRIM67Q6ZTA4 783 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 FIBCD1Q8N539 461 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 DCAF4Q8WV16 495 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 SEPT8Q92599 483 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 KAT2BQ92831 832 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 RPGRIP1Q96KN7 1286 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 SAMD11Q96NU1 681 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 SEC62Q99442 399 aaKnown RBP8.09□□□□□ -1.11
HDAC1-204ENST00000471488 KATNAL1Q9BW62 490 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 LRRCC1Q9C099 1032 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 RANBP17Q9H2T7 1088 aaKnown RBP8.09□□□□□ -1.11
HDAC1-204ENST00000471488 TLR9Q9NR96 1032 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 CD207Q9UJ71 328 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 LCTP09848 1927 aa8.09□□□□□ -1.11
HDAC1-204ENST00000471488 EMSYQ7Z589 1322 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 SCN10AQ9Y5Y9 1956 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 C19orf67A6NJJ6 358 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 GRM6O15303 877 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 MYCLP12524 364 aaPredicted RBP8.08□□□□□ -1.12
HDAC1-204ENST00000471488 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
HDAC1-204ENST00000471488 ARHGAP1Q07960 439 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 TCF15Q12870 199 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 SMAD4Q13485 552 aaKnown RBP8.08□□□□□ -1.12
HDAC1-204ENST00000471488 MBTPS1Q14703 1052 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 SMAD2Q15796 467 aaKnown RBP8.08□□□□□ -1.12
HDAC1-204ENST00000471488 STXBP2Q15833 593 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 RBM23Q86U06 439 aaKnown RBP8.08□□□□□ -1.12
HDAC1-204ENST00000471488 FBXL6Q8N531 539 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 KBTBD3Q8NAB2 608 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 IL17RAQ96F46 866 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 CTAGE1Q96RT6 745 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms