RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CMTR1Q8N1G2 835 aaKnown RBP17.81■□□□□ 0.44
COL1A1-203ENST00000471344 MAF1Q9H063 256 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 SEMA6BQ9H3T3 888 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 CXXC1Q9P0U4 656 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-203ENST00000471344 CHD7Q9P2D1 2997 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 PNMA6FA0A0J9YX94 578 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 GH1P01241 217 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 PBX2P40425 430 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 PGM5Q15124 567 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 RASIP1Q5U651 963 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 CASC1Q6TDU7 716 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 FCHSD1Q86WN1 690 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 GPKOWQ92917 476 aaPredicted RBP eCLIP17.8■□□□□ 0.44
COL1A1-203ENST00000471344 CDX2Q99626 313 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-203ENST00000471344 IL23AQ9NPF7 189 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 DDX41Q9UJV9 622 aaKnown RBP17.8■□□□□ 0.44
COL1A1-203ENST00000471344 GBF1Q92538 1859 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 TANC1Q9C0D5 1861 aa17.8■□□□□ 0.44
COL1A1-203ENST00000471344 MYH7BA7E2Y1 1941 aa17.79■□□□□ 0.44
COL1A1-203ENST00000471344 EIF3JO75822 258 aaKnown RBP17.79■□□□□ 0.44
COL1A1-203ENST00000471344 DDAH1O94760 285 aa17.79■□□□□ 0.44
COL1A1-203ENST00000471344 DNAJB2P25686 324 aa17.79■□□□□ 0.44
COL1A1-203ENST00000471344 SLC17A8Q8NDX2 589 aa17.79■□□□□ 0.44
COL1A1-203ENST00000471344 KAT2BQ92831 832 aa17.79■□□□□ 0.44
COL1A1-203ENST00000471344 MRVI1Q9Y6F6 885 aa17.79■□□□□ 0.44
COL1A1-203ENST00000471344 hCG_1642624A0A1W2PR95 340 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 GCOM1H8Y6P7 765 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-203ENST00000471344 POLR2MP0CAP2 368 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 ZNF286BP0CG31 522 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 MCM5P33992 734 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 BRDTQ58F21 947 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-203ENST00000471344 PSRC1Q6PGN9 363 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-203ENST00000471344 NFXL1Q6ZNB6 911 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 OTOP2Q7RTS6 562 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 SRBD1Q8N5C6 995 aaKnown RBP17.78■□□□□ 0.44
COL1A1-203ENST00000471344 CTCFLQ8NI51 663 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-203ENST00000471344 MYLIPQ8WY64 445 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 SPZ1Q9BXG8 430 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 SEZ6LQ9BYH1 1024 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 DOCK5Q9H7D0 1870 aa17.78■□□□□ 0.44
COL1A1-203ENST00000471344 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.77■□□□□ 0.44
COL1A1-203ENST00000471344 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.77■□□□□ 0.44
COL1A1-203ENST00000471344 SP2Q02086 613 aa17.77■□□□□ 0.44
COL1A1-203ENST00000471344 NFRKBQ6P4R8 1299 aa17.77■□□□□ 0.44
COL1A1-203ENST00000471344 VSIG10LQ86VR7 867 aa17.77■□□□□ 0.44
COL1A1-203ENST00000471344 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.44
COL1A1-203ENST00000471344 BCAS3Q9H6U6 928 aa17.77■□□□□ 0.44
COL1A1-203ENST00000471344 CCDC69A6NI79 296 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 KPNA6O60684 536 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 UBA1P22314 1058 aaKnown RBP17.76■□□□□ 0.43
COL1A1-203ENST00000471344 GDF6Q6KF10 455 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-203ENST00000471344 RASEFQ8IZ41 740 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 HERVK_113Q902F9 699 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 TMEM87BQ96K49 555 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 PBX4Q9BYU1 374 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 VCANP13611 3396 aa17.76■□□□□ 0.43
COL1A1-203ENST00000471344 FRMPD4Q14CM0 1322 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 FGBP02675 491 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 SUPT20HL2P0C7V6 817 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 CCND2P30279 289 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 KIF5BP33176 963 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 MRPS9P82933 396 aaKnown RBP17.75■□□□□ 0.43
COL1A1-203ENST00000471344 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 ADCK5Q3MIX3 580 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 HSDL1Q3SXM5 330 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 USP17L6PQ6QN14 398 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 DEFB128Q7Z7B8 93 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 MICU3Q86XE3 530 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 DHX37Q8IY37 1157 aaKnown RBP17.75■□□□□ 0.43
COL1A1-203ENST00000471344 CCDC82Q8N4S0 544 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 EMID1Q96A84 441 aaPredicted RBP17.75■□□□□ 0.43
COL1A1-203ENST00000471344 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
COL1A1-203ENST00000471344 RRP36Q96EU6 259 aaKnown RBP17.75■□□□□ 0.43
COL1A1-203ENST00000471344 MAP3K20Q9NYL2 800 aaKnown RBP17.75■□□□□ 0.43
COL1A1-203ENST00000471344 REV3LO60673 3130 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 CDC45O75419 566 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 GGPS1O95749 300 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 LIFRP42702 1097 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 SEMA3FQ13275 785 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 DGKDQ16760 1214 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 MYSM1Q5VVJ2 828 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 SAMD3Q8N6K7 520 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 PPTC7Q8NI37 304 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
COL1A1-203ENST00000471344 ALG1Q9BT22 464 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 MTA3Q9BTC8 594 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 TELO2Q9Y4R8 837 aa17.74■□□□□ 0.43
COL1A1-203ENST00000471344 MEIS2O14770 477 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
COL1A1-203ENST00000471344 PSEN2P49810 448 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 LAMC2Q13753 1193 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 HIC1Q14526 733 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 PTGISQ16647 500 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 CELF3Q5SZQ8 465 aaKnown RBP17.73■□□□□ 0.43
COL1A1-203ENST00000471344 TMTC3Q6ZXV5 915 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 SPATA33Q96N06 139 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 RTEL1Q9NZ71 1219 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 HDAC6Q9UBN7 1215 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms