RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
VPS52-216ENST00000471309 MARCH6O60337 910 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 PLCG1P19174 1290 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 CDC25AP30304 524 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 SETQ01105 290 aaPredicted RBP10.57□□□□□ -0.72
VPS52-216ENST00000471309 CCDC173Q0VFZ6 552 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 DPYDQ12882 1025 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 NAALADL2Q58DX5 795 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 MUM1L1Q5H9M0 696 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 TREML2Q5T2D2 321 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 RRAGBQ5VZM2 374 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 KRT79Q5XKE5 535 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 SNRNP48Q6IEG0 339 aaKnown RBP10.57□□□□□ -0.72
VPS52-216ENST00000471309 GRAMD1CQ8IYS0 662 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 MB21D1Q8N884 522 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 CALML4Q96GE6 196 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 FAM20AQ96MK3 541 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 TRERF1Q96PN7 1200 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 GSDMAQ96QA5 445 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 HOMER2Q9NSB8 354 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 COL20A1Q9P218 1284 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 MAN1B1Q9UKM7 699 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 PCDHA12Q9UN75 941 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 AGTPBP1Q9UPW5 1226 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 KDM3AQ9Y4C1 1321 aa10.57□□□□□ -0.72
VPS52-216ENST00000471309 TRAF5O00463 557 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 BIN1O00499 593 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 ZNF76P36508 570 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 AFMP43652 599 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 RPS6P62753 249 aaKnown RBP10.56□□□□□ -0.72
VPS52-216ENST00000471309 SPIRE1Q08AE8 756 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 MORC3Q14149 939 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 TMEM132BQ14DG7 1078 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 IQCB1Q15051 598 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 TMEM119Q4V9L6 283 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 HYIQ5T013 277 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 PCNX4Q63HM2 1172 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 SLC30A10Q6XR72 485 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 LBX2Q6XYB7 198 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 GADL1Q6ZQY3 521 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 RNF207Q6ZRF8 634 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 FASTKD5Q7L8L6 764 aaKnown RBP10.56□□□□□ -0.72
VPS52-216ENST00000471309 NIPA1Q7RTP0 329 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 LUZP1Q86V48 1076 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 SYTL5Q8TDW5 730 aaPredicted RBP10.56□□□□□ -0.72
VPS52-216ENST00000471309 SNX29Q8TEQ0 813 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 PPP1R9BQ96SB3 815 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 MTRQ99707 1265 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 ACAD9Q9H845 621 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 KBTBD4Q9NVX7 518 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 DACH1Q9UI36 760 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 STK24Q9Y6E0 443 aa10.56□□□□□ -0.72
VPS52-216ENST00000471309 LCTP09848 1927 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 A0A087WWV3 80 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 MEIS1O00470 390 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 MSH4O15457 936 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 BCRP11274 1271 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 IRX3P78415 501 aaPredicted RBP10.55□□□□□ -0.72
VPS52-216ENST00000471309 PABPC4Q13310 644 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS52-216ENST00000471309 GRB10Q13322 594 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 MOGSQ13724 837 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 CT47A1Q5JQC4 288 aaPredicted RBP10.55□□□□□ -0.72
VPS52-216ENST00000471309 HAUS3Q68CZ6 603 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 PLA2G4DQ86XP0 818 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 DHX40Q8IX18 779 aaKnown RBP10.55□□□□□ -0.72
VPS52-216ENST00000471309 MLKLQ8NB16 471 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 CHST13Q8NET6 341 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 ERMNQ8TAM6 284 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 LRRC15Q8TF66 581 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 SLC5A5Q92911 643 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 CDK5RAP3Q96JB5 506 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 PDLIM2Q96JY6 352 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 PNMA5Q96PV4 448 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 NT5C3AQ9H0P0 336 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 RMND1Q9NWS8 449 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 VAV3Q9UKW4 847 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 RIPK3Q9Y572 518 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 LRRC37A2A6NM11 1700 aa10.55□□□□□ -0.72
VPS52-216ENST00000471309 BECN2A8MW95 431 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 GOLGA6L19H0YKK7 550 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 IKBKBO14920 756 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 BMP6P22004 513 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 STAT3P40763 770 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 UBXN2AP68543 259 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 SNAPC2Q13487 334 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 CUL4BQ13620 913 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 BAATQ14032 418 aaPredicted RBP10.54□□□□□ -0.72
VPS52-216ENST00000471309 NSMFQ6X4W1 530 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 AOPEPQ8N6M6 819 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 CYP2W1Q8TAV3 490 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 GJA10Q969M2 543 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 MXRA8Q9BRK3 442 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 WDR11Q9BZH6 1224 aa10.54□□□□□ -0.72
VPS52-216ENST00000471309 ASCC2Q9H1I8 757 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms