RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	ECE2	O60344	883 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	ZSCAN20	P17040	1043 aa	Predicted RBP	18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	CHMP4BP1	P59074	171 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	GABPB1	Q06547	395 aa	Predicted RBP	18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	SLFN13	Q68D06	897 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	WDR59	Q6PJI9	974 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	DYM	Q7RTS9	669 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	C2CD5	Q86YS7	1000 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	ZFPM1	Q8IX07	1006 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	CCDC170	Q8IYT3	715 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	DDX12P	Q92771	950 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308	FAM198A	Q9UFP1	575 aa		18.86	■□□□□ 0.61
PCBP4-208	ENST00000471308		H0YIN7	160 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	RBM5	P52756	815 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	CDK17	Q00537	523 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	CDC37	Q16543	378 aa	Predicted RBP	18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	EHBP1	Q8NDI1	1231 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	TSG101	Q99816	390 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	PCDHA1	Q9Y5I3	950 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	DDTL	A6NHG4	134 aa	Predicted RBP	18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	IPO7	O95373	1038 aa	Known RBP	18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	APBA3	O96018	575 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	IDE	P14735	1019 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	ICA1	Q05084	483 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	TCP10	Q12799	353 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	MAN2A1	Q16706	1144 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	WHAMMP3	Q1A5X7	153 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	NUDT12	Q9BQG2	462 aa		18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	REXO2	Q9Y3B8	237 aa	Known RBP	18.85	■□□□□ 0.61
PCBP4-208	ENST00000471308	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	POTEB2	H3BUK9	544 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	CYP3A7	P24462	503 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	UTP14C	Q5TAP6	766 aa	Known RBP	18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	GMCL1P1	Q8NEA9	526 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	HPS3	Q969F9	1004 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	MBOAT7	Q96N66	472 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	ANO3	Q9BYT9	981 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	ATRNL1	Q5VV63	1379 aa		18.84	■□□□□ 0.61
PCBP4-208	ENST00000471308	DMTN	Q08495	405 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	VWA3B	Q502W6	1294 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	KCNK18	Q7Z418	384 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	CCDC84	Q86UT8	332 aa	Predicted RBP	18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	SLFN12	Q8IYM2	578 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	GMCL1	Q96IK5	515 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	KCNMB3	Q9NPA1	279 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	KCNQ5	Q9NR82	932 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	AGPAT5	Q9NUQ2	364 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	FHOD1	Q9Y613	1164 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	PSME4	Q14997	1843 aa		18.83	■□□□□ 0.61
PCBP4-208	ENST00000471308	PNMA6A	P0CW24	399 aa	Predicted RBP	18.83	■□□□□ 0.6
PCBP4-208	ENST00000471308	CACNB3	P54284	484 aa		18.83	■□□□□ 0.6
PCBP4-208	ENST00000471308	COASY	Q13057	564 aa		18.83	■□□□□ 0.6
PCBP4-208	ENST00000471308	PRDM10	Q9NQV6	1147 aa		18.83	■□□□□ 0.6
PCBP4-208	ENST00000471308	RASSF10	A6NK89	507 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	EIF3CL	B5ME19	914 aa	Known RBP	18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	KRT86	O43790	486 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	RAD21	O60216	631 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	ENTPD3	O75355	529 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	SH3BP5L	Q7L8J4	393 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	MYOCD	Q8IZQ8	938 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	DNAJC19	Q96DA6	116 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	EEF2KMT	Q96G04	330 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	EIF3C	Q99613	913 aa	Known RBP	18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	AMN	Q9BXJ7	453 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	NDST4	Q9H3R1	872 aa		18.82	■□□□□ 0.6
PCBP4-208	ENST00000471308	FAM196B	A6NMK8	535 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L15	C9J2P7	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L13	C9JLJ4	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L11	C9JVI0	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L18	D6R9N7	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L22	D6RA61	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L17	D6RBQ6	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L19	D6RCP7	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L20	D6RJB6	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	PSMD14	O00487	310 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L24	Q0WX57	530 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	ABCB5	Q2M3G0	1257 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	HAUS3	Q68CZ6	603 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	USP17L6P	Q6QN14	398 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	CNKSR1	Q969H4	720 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	SYNPO2	Q9UMS6	1093 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	TBX3	O15119	743 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	KIF20A	O95235	890 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	ABL1	P00519	1130 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	HNRNPH3	P31942	346 aa	Known RBP	18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	HERVK_113	P62684	666 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	ECM1	Q16610	540 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	FAM26F	Q5R3K3	315 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	LRRC55	Q6ZSA7	311 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	KIAA1328	Q86T90	577 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	CCDC65	Q8IXS2	484 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	PANK4	Q9NVE7	773 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	GUCA1B	Q9UMX6	200 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	PCDHAC2	Q9Y5I4	1007 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	STK24	Q9Y6E0	443 aa		18.81	■□□□□ 0.6
PCBP4-208	ENST00000471308	TNS1	Q9HBL0	1735 aa	Known RBP	18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms