RNA–Protein interactions for RNA: ENST00000471215.1

BUD23-215, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, human

TSL 2

Gene BUD23, Length 3,886 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BUD23-215	ENST00000471215	ALS2CR12	Q96Q35	445 aa		11.01	□□□□□ -0.65
BUD23-215	ENST00000471215	FUT8	Q9BYC5	575 aa		11.01	□□□□□ -0.65
BUD23-215	ENST00000471215	ANKZF1	Q9H8Y5	726 aa		11.01	□□□□□ -0.65
BUD23-215	ENST00000471215	JMJD4	Q9H9V9	463 aa		11.01	□□□□□ -0.65
BUD23-215	ENST00000471215	SWAP70	Q9UH65	585 aa		11.01	□□□□□ -0.65
BUD23-215	ENST00000471215	PVALEF	A0A1B0GWK0	134 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	TUBB	P07437	444 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	SLURP2	P0DP57	97 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	ZNF543	Q08ER8	600 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	FAM26F	Q5R3K3	315 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	WDR59	Q6PJI9	974 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	SMCR8	Q8TEV9	937 aa	Predicted RBP	11	□□□□□ -0.65
BUD23-215	ENST00000471215	FAM163A	Q96GL9	167 aa	Predicted RBP	11	□□□□□ -0.65
BUD23-215	ENST00000471215	TRERF1	Q96PN7	1200 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	NUDT12	Q9BQG2	462 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	MMTAG2	Q9BU76	263 aa	Known RBP	11	□□□□□ -0.65
BUD23-215	ENST00000471215	DBNDD1	Q9H9R9	158 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	DUSP10	Q9Y6W6	482 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	ESYT2	A0FGR8	921 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	EIF4A3	P38919	411 aa	Known RBP	11	□□□□□ -0.65
BUD23-215	ENST00000471215	HERVK_113	P62684	666 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	USH1G	Q495M9	461 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11	□□□□□ -0.65
BUD23-215	ENST00000471215	TSGA10	Q9BZW7	698 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	LACRT	Q9GZZ8	138 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	DDX4	Q9NQI0	724 aa	Known RBP	11	□□□□□ -0.65
BUD23-215	ENST00000471215	REXO2	Q9Y3B8	237 aa	Known RBP	11	□□□□□ -0.65
BUD23-215	ENST00000471215	MCM3	P25205	808 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	GPBP1	Q86WP2	473 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215	IRS2	Q9Y4H2	1338 aa		11	□□□□□ -0.65
BUD23-215	ENST00000471215		E9PMD0	336 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	ZBTB5	O15062	677 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	PLEK	P08567	350 aa	Predicted RBP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	PAFAH1B1	P43034	410 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	SNAP25	P60880	206 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	ORC2	Q13416	577 aa	Predicted RBP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	PDIA5	Q14554	519 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	SP8	Q8IXZ3	490 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	GUF1	Q8N442	669 aa	Known RBP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	PNMA5	Q96PV4	448 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	CRAMP1	Q96RY5	1269 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	NT5C3A	Q9H0P0	336 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	RIC8A	Q9NPQ8	531 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	LUC7L	Q9NQ29	371 aa	Known RBP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	BLOC1S4	Q9NUP1	217 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	CALCOCO1	Q9P1Z2	691 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	EIF3CL	B5ME19	914 aa	Known RBP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	FXR2	P51116	673 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	CERKL	Q49MI3	558 aa	Predicted RBP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	SLFN13	Q68D06	897 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	MMS19	Q96T76	1030 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	EIF3C	Q99613	913 aa	Known RBP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	KIF11	P52732	1056 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	VAV2	P52735	878 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	LRRC63	Q05C16	580 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	SKIDA1	Q1XH10	827 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	PRR16	Q569H4	304 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	TCERG1L	Q5VWI1	586 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	CENPP	Q6IPU0	288 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	MTMR9	Q96QG7	549 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	FAM53C	Q9NYF3	392 aa		10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
BUD23-215	ENST00000471215	SPDYE3	A6NKU9	549 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	ZNF185	O15231	689 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	FECH	P22830	423 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	FKBP3	Q00688	224 aa	Known RBP	10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	CRY2	Q49AN0	593 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	CDC42EP5	Q6NZY7	148 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	LEKR1	Q6ZMV7	388 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	TXLNB	Q8N3L3	684 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	TRIM58	Q8NG06	486 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	KANSL2	Q9H9L4	492 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	PCDHA13	Q9Y5I0	950 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	GAK	O14976	1311 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	LRRC53	A6NM62	1247 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	PSMD14	O00487	310 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	MOCS3	O95396	460 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	NFIA	Q12857	509 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	RAPGEF1	Q13905	1077 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	CASP8	Q14790	479 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	KCNK18	Q7Z418	384 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	CCDC155	Q8N6L0	562 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	CERK	Q8TCT0	537 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	ERGIC2	Q96RQ1	377 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	BUB1	O43683	1085 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	CXCR5	P32302	372 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	DDR1	Q08345	913 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	COASY	Q13057	564 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	PSMD2	Q13200	908 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	TAF3	Q5VWG9	929 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	ERMN	Q8TAM6	284 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	IQCD	Q96DY2	449 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	LSM14B	Q9BX40	385 aa	Known RBP	10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	MLXIP	Q9HAP2	919 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	ATP6V0A2	Q9Y487	856 aa		10.98	□□□□□ -0.65
BUD23-215	ENST00000471215	AFF2	P51816	1311 aa		10.97	□□□□□ -0.65
BUD23-215	ENST00000471215	PLA2G4B	P0C869	781 aa		10.97	□□□□□ -0.65
BUD23-215	ENST00000471215	ALDH1B1	P30837	517 aa		10.97	□□□□□ -0.65
BUD23-215	ENST00000471215	POLR2F	P61218	127 aa	Known RBP	10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms