RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ANKRD13AQ8IZ07 590 aa20.39■□□□□ 0.85
SMC4-211ENST00000469858 OTUD5Q96G74 571 aa20.39■□□□□ 0.85
SMC4-211ENST00000469858 CLMNQ96JQ2 1002 aa20.39■□□□□ 0.85
SMC4-211ENST00000469858 TRERF1Q96PN7 1200 aa20.39■□□□□ 0.85
SMC4-211ENST00000469858 COL20A1Q9P218 1284 aa20.39■□□□□ 0.85
SMC4-211ENST00000469858 IGLV3-22A0A075B6J6 115 aa20.38■□□□□ 0.85
SMC4-211ENST00000469858 MSH4O15457 936 aa20.38■□□□□ 0.85
SMC4-211ENST00000469858 RPN1P04843 607 aaKnown RBP20.38■□□□□ 0.85
SMC4-211ENST00000469858 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
SMC4-211ENST00000469858 TPM4P67936 248 aa20.38■□□□□ 0.85
SMC4-211ENST00000469858 MYL5Q02045 173 aa20.38■□□□□ 0.85
SMC4-211ENST00000469858 PNMA8AQ86V59 439 aaPredicted RBP20.38■□□□□ 0.85
SMC4-211ENST00000469858 REPS2Q8NFH8 660 aa20.38■□□□□ 0.85
SMC4-211ENST00000469858 STAT3P40763 770 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 SARM1Q6SZW1 724 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 ZFP91Q96JP5 570 aaPredicted RBP20.37■□□□□ 0.85
SMC4-211ENST00000469858 FAM20AQ96MK3 541 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 STK17AQ9UEE5 414 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 ADAMTS5Q9UNA0 930 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 CLEC11AQ9Y240 323 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 LOC285556D6RIA3 1793 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 MYL1P05976 194 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 ZNF75DP51815 510 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 GHRHRQ02643 423 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 DHX8Q14562 1220 aaKnown RBP20.37■□□□□ 0.85
SMC4-211ENST00000469858 SNRNP48Q6IEG0 339 aaKnown RBP20.37■□□□□ 0.85
SMC4-211ENST00000469858 SMYD4Q8IYR2 804 aaPredicted RBP20.37■□□□□ 0.85
SMC4-211ENST00000469858 RNF146Q9NTX7 359 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 BLOC1S4Q9NUP1 217 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 RMND1Q9NWS8 449 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 RIPK3Q9Y572 518 aa20.37■□□□□ 0.85
SMC4-211ENST00000469858 SPDYE16A6NNV3 312 aaPredicted RBP20.36■□□□□ 0.85
SMC4-211ENST00000469858 IRF6O14896 467 aa20.36■□□□□ 0.85
SMC4-211ENST00000469858 CCT6AP40227 531 aaKnown RBP20.36■□□□□ 0.85
SMC4-211ENST00000469858 RPS6P62753 249 aaKnown RBP20.36■□□□□ 0.85
SMC4-211ENST00000469858 TREML2Q5T2D2 321 aa20.36■□□□□ 0.85
SMC4-211ENST00000469858 SLC30A10Q6XR72 485 aa20.36■□□□□ 0.85
SMC4-211ENST00000469858 PLA2G4DQ86XP0 818 aa20.36■□□□□ 0.85
SMC4-211ENST00000469858 ERO1BQ86YB8 467 aa20.36■□□□□ 0.85
SMC4-211ENST00000469858 SYTL5Q8TDW5 730 aaPredicted RBP20.36■□□□□ 0.85
SMC4-211ENST00000469858 ZNF214Q9UL59 606 aaPredicted RBP20.36■□□□□ 0.85
SMC4-211ENST00000469858 KDM3AQ9Y4C1 1321 aa20.36■□□□□ 0.85
SMC4-211ENST00000469858 POTEIP0CG38 1075 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 POTEJP0CG39 1038 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 OAZ1P54368 228 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 PPATQ06203 517 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 FMR1Q06787 632 aaKnown RBP eCLIP20.35■□□□□ 0.853e-7■□□□□ 10
SMC4-211ENST00000469858 SPIRE1Q08AE8 756 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 TMEM132BQ14DG7 1078 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 ECM1Q16610 540 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 TMEM119Q4V9L6 283 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 CEP55Q53EZ4 464 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 NCAPH2Q6IBW4 605 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 NSMFQ6X4W1 530 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 GADL1Q6ZQY3 521 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 LARP4BQ92615 738 aaKnown RBP20.35■□□□□ 0.85
SMC4-211ENST00000469858 HOXC10Q9NYD6 342 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 RPTORQ8N122 1335 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 CD44P16070 742 aaKnown RBP20.35■□□□□ 0.85
SMC4-211ENST00000469858 MCM6Q14566 821 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 KLHL10Q6JEL2 608 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 RNF207Q6ZRF8 634 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 TRMT44Q8IYL2 757 aaKnown RBP20.35■□□□□ 0.85
SMC4-211ENST00000469858 TRIM9Q9C026 710 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 MAP3K20Q9NYL2 800 aaKnown RBP20.35■□□□□ 0.85
SMC4-211ENST00000469858 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
SMC4-211ENST00000469858 MYPNQ86TC9 1320 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 SPDYE5A6NIY4 337 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 AMPD3Q01432 767 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 PLS1Q14651 629 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 SV2BQ7L1I2 683 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 ARMC9Q7Z3E5 817 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 KCNK18Q7Z418 384 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 SAMD3Q8N6K7 520 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 SPC24Q8NBT2 197 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 IL31RAQ8NI17 732 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 RAD54LQ92698 747 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 ASIC1P78348 528 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 KMT5BQ4FZB7 885 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 ZNF658Q5TYW1 1059 aaPredicted RBP20.34■□□□□ 0.85
SMC4-211ENST00000469858 HAUS3Q68CZ6 603 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 TEX13BQ9BXU2 312 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 NT5C3AQ9H0P0 336 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 HSD3B7Q9H2F3 369 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 VAV3Q9UKW4 847 aa20.34■□□□□ 0.85
SMC4-211ENST00000469858 A0A0G2JLL6 359 aaPredicted RBP20.33■□□□□ 0.84
SMC4-211ENST00000469858 POTEB3A0JP26 581 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 KLRC4O43908 158 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 ERCC5P28715 1186 aaPredicted RBP20.33■□□□□ 0.84
SMC4-211ENST00000469858 SETQ01105 290 aaPredicted RBP20.33■□□□□ 0.84
SMC4-211ENST00000469858 HYIQ5T013 277 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.84
SMC4-211ENST00000469858 POTEBQ6S5H4 581 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 PRRT2Q7Z6L0 340 aaPredicted RBP20.33■□□□□ 0.84
SMC4-211ENST00000469858 ERMNQ8TAM6 284 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 C7orf25Q9BPX7 421 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 FANCLQ9NW38 375 aa20.33■□□□□ 0.84
SMC4-211ENST00000469858 PPP1R3GB7ZBB8 358 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 ATP2A1O14983 1001 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms