RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
SMC4-210ENST00000469762 SUGP1Q8IWZ8 645 aaKnown RBP11.41□□□□□ -0.58
SMC4-210ENST00000469762 NAV1Q8NEY1 1877 aa11.41□□□□□ -0.58
SMC4-210ENST00000469762 IPO7O95373 1038 aaKnown RBP11.4□□□□□ -0.58
SMC4-210ENST00000469762 GUCY2CP25092 1073 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 FNTAP49354 379 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 ECM1Q16610 540 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 GALNT17Q6IS24 598 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 SH3RF3Q8TEJ3 882 aaPredicted RBP11.4□□□□□ -0.58
SMC4-210ENST00000469762 FGFBP2Q9BYJ0 223 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 MAN2A1Q16706 1144 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 KCTD19Q17RG1 926 aaPredicted RBP11.4□□□□□ -0.58
SMC4-210ENST00000469762 ZCWPW2Q504Y3 356 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 EMC10Q5UCC4 262 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 FBXW10Q5XX13 1052 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 ALS2CLQ60I27 953 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 KCTD16Q68DU8 428 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 MICALL1Q8N3F8 863 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 MMRN2Q9H8L6 949 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 TMEM260Q9NX78 707 aa11.4□□□□□ -0.58
SMC4-210ENST00000469762 USO1O60763 962 aaKnown RBP11.4□□□□□ -0.59
SMC4-210ENST00000469762 ZPR1O75312 459 aa11.4□□□□□ -0.59
SMC4-210ENST00000469762 MAGEA1P43355 309 aa11.4□□□□□ -0.59
SMC4-210ENST00000469762 IQCEQ6IPM2 695 aa11.4□□□□□ -0.59
SMC4-210ENST00000469762 GBP6Q6ZN66 633 aa11.4□□□□□ -0.59
SMC4-210ENST00000469762 ACSBG1Q96GR2 724 aa11.4□□□□□ -0.59
SMC4-210ENST00000469762 RNPC3Q96LT9 517 aaKnown RBP11.4□□□□□ -0.59
SMC4-210ENST00000469762 TCP11L1Q9NUJ3 509 aa11.4□□□□□ -0.59
SMC4-210ENST00000469762 NFU1Q9UMS0 254 aa11.4□□□□□ -0.59
SMC4-210ENST00000469762 COL14A1Q05707 1796 aaKnown RBP11.4□□□□□ -0.59
SMC4-210ENST00000469762 SLC37A4O43826 429 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 RASA1P20936 1047 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 DYMQ7RTS9 669 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 ECHS1P30084 290 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 LRRC41Q15345 812 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 CNNM4Q6P4Q7 775 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 TBCKQ8TEA7 893 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 INPP4AQ96PE3 977 aaPredicted RBP11.39□□□□□ -0.59
SMC4-210ENST00000469762 MYH4Q9Y623 1939 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 KLRF2D3W0D1 207 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 AKR1B10O60218 316 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 ZBTB48P10074 688 aaPredicted RBP11.39□□□□□ -0.59
SMC4-210ENST00000469762 MYBP10242 640 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 ATP1A2P50993 1020 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 UNC13DQ70J99 1090 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 CASKIN2Q8WXE0 1202 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 PACSIN2Q9UNF0 486 aaPredicted RBP11.39□□□□□ -0.59
SMC4-210ENST00000469762 ABCB11O95342 1321 aa11.39□□□□□ -0.59
SMC4-210ENST00000469762 SMCO2A6NFE2 343 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 EBAG9O00559 213 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 KLRC1P26715 233 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 HIBADHP31937 336 aaKnown RBP11.38□□□□□ -0.59
SMC4-210ENST00000469762 NNTQ13423 1086 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 DPY19L2P1Q6NXN4 242 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 GUF1Q8N442 669 aaKnown RBP11.38□□□□□ -0.59
SMC4-210ENST00000469762 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 SSU72P8A0A1W2PR75 194 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 GTF2A1P52655 376 aaPredicted RBP11.38□□□□□ -0.59
SMC4-210ENST00000469762 NONOQ15233 471 aaKnown RBP eCLIP11.38□□□□□ -0.592e-8■■■■■ 98.1
SMC4-210ENST00000469762 C8orf74Q6P047 294 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 MMS22LQ6ZRQ5 1243 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 NEK8Q86SG6 692 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 PACSIN1Q9BY11 444 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 PALMO75781 387 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 ERLIN2O94905 339 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 HNRNPH1P31943 449 aaKnown RBP11.38□□□□□ -0.59
SMC4-210ENST00000469762 GUCY1A3Q02108 690 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 MREGQ8N565 214 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 IQCDQ96DY2 449 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 CCDC43Q96MW1 224 aaKnown RBP11.38□□□□□ -0.59
SMC4-210ENST00000469762 KANSL2Q9H9L4 492 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 EPB41L5Q9HCM4 733 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
SMC4-210ENST00000469762 POTEMA6NI47 508 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 BHMG1C9JSJ3 638 aaPredicted RBP11.37□□□□□ -0.59
SMC4-210ENST00000469762 FTCDO95954 541 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 TXKP42681 527 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 KDM7AQ6ZMT4 941 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 DNAJC19Q96DA6 116 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 NLRC4Q9NPP4 1024 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 BIN2Q9UBW5 565 aaPredicted RBP11.37□□□□□ -0.59
SMC4-210ENST00000469762 PVALEFA0A1B0GWK0 134 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 OPA1O60313 960 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 GNAQP50148 359 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 NAPAP54920 295 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 MEI1Q5TIA1 1274 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 KRT25Q7Z3Z0 450 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 CD302Q8IX05 232 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 RNF10Q8N5U6 811 aaKnown RBP11.37□□□□□ -0.59
SMC4-210ENST00000469762 PCDHGC5Q9Y5F6 944 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 HEXIM1O94992 359 aaKnown RBP11.37□□□□□ -0.59
SMC4-210ENST00000469762 TDP2O95551 362 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 TM4SF1P30408 202 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 LSP1P33241 339 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 PPP1R2P41236 205 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms