RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 ACTN2P35609 894 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 DIXDC1Q155Q3 683 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 LETM2Q2VYF4 491 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 IQCEQ6IPM2 695 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 LEKR1Q6ZMV7 388 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 CCDC102AQ96A19 550 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 CALML4Q96GE6 196 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 TSPYL1Q9H0U9 437 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 AGPAT5Q9NUQ2 364 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 VAV2P52735 878 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 MIIPQ5JXC2 388 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 CERS5Q8N5B7 392 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 RRP36Q96EU6 259 aaKnown RBP15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 MTMR7Q9Y216 660 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 LRRIQ3A6PVS8 624 aaPredicted RBP15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 YDJCA8MPS7 323 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 N4BP1O75113 896 aaKnown RBP15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 SMARCA1P28370 1054 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 HOXA7P31268 230 aaPredicted RBP15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 STK4Q13043 487 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 CAGE1Q8TC20 777 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 TGFBRAP1Q8WUH2 860 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 SMCO2A6NFE2 343 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 F8W031 263 aaPredicted RBP15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 GOLGA8HP0CJ92 632 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 AARSP49588 968 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 KLK7P49862 253 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 KIF5AQ12840 1032 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 SLC44A5Q8NCS7 719 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 SEC63Q9UGP8 760 aaKnown RBP15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 ABCB11O95342 1321 aa15.79■□□□□ 0.12
SMARCD3-205ENST00000469154 IVLP07476 585 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 IRX5P78411 483 aaPredicted RBP15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 SPA17Q15506 151 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 SECISBP2LQ93073 1101 aaKnown RBP15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 LACRTQ9GZZ8 138 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 STK17AQ9UEE5 414 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 TFR2Q9UP52 801 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 ESYT2A0FGR8 921 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 RCCD1A6NED2 376 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 hCG_1984214I3L0E3 225 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 USO1O60763 962 aaKnown RBP15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 SRGAP2O75044 1071 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 FCER1AP12319 257 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 HNRNPH3P31942 346 aaKnown RBP15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 RASSF7Q02833 373 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 MAPKAPK5Q8IW41 473 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 ZNF713Q8N859 430 aaPredicted RBP15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 NEDD1Q8NHV4 660 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 CAPZA3Q96KX2 299 aa15.78■□□□□ 0.12
SMARCD3-205ENST00000469154 RPS6KA5O75582 802 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 FGFR1OPO95684 399 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 IDEP14735 1019 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 CAPN2P17655 700 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 TECP42680 631 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 TNNT3P45378 269 aaPredicted RBP15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 CENPPQ6IPU0 288 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 CCDC70Q6NSX1 233 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 C16orf86Q6ZW13 317 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 SV2BQ7L1I2 683 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 KIAA0895Q8NCT3 520 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 CCDC42Q96M95 316 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 MMTAG2Q9BU76 263 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 SAP30BPQ9UHR5 308 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 SCN9AQ15858 1988 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 COL4A5P29400 1685 aa15.77■□□□□ 0.12
SMARCD3-205ENST00000469154 FOCADQ5VW36 1801 aa15.77■□□□□ 0.11
SMARCD3-205ENST00000469154 RAD17O75943 681 aa15.77■□□□□ 0.11
SMARCD3-205ENST00000469154 DACT2Q5SW24 774 aa15.77■□□□□ 0.11
SMARCD3-205ENST00000469154 NIM1KQ8IY84 436 aa15.77■□□□□ 0.11
SMARCD3-205ENST00000469154 TRIM58Q8NG06 486 aa15.77■□□□□ 0.11
SMARCD3-205ENST00000469154 VPS33BQ9H267 617 aa15.77■□□□□ 0.11
SMARCD3-205ENST00000469154 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.11
SMARCD3-205ENST00000469154 PVALEFA0A1B0GWK0 134 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 SOCS7O14512 581 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 TACC1O75410 805 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 CDK8P49336 464 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 VWA3BQ502W6 1294 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 UNC13DQ70J99 1090 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 REXO1Q8N1G1 1221 aaKnown RBP15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 GOLGA6L1Q8N7Z2 621 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 TBCKQ8TEA7 893 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 RUBCNQ92622 972 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 HPCAL4Q9UM19 191 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 FER1L6Q2WGJ9 1857 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 MAN2A1Q16706 1144 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 KIAA0825Q8IV33 1275 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 PLAGL2Q9UPG8 496 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 JRKLQ9Y4A0 524 aa15.76■□□□□ 0.11
SMARCD3-205ENST00000469154 MACROD2A1Z1Q3 448 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 SCNN1DP51172 638 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 CCDC96Q2M329 555 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 ARHGAP27Q6ZUM4 889 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 COG1Q8WTW3 980 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms