RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
SMC1A-205ENST00000469129 RAD54LQ92698 747 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 HAS1Q92839 578 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 KLRG1Q96E93 195 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 L3MBTL3Q96JM7 780 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-205ENST00000469129 C7orf25Q9BPX7 421 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 BLZF1Q9H2G9 400 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 RPAP3Q9H6T3 665 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-205ENST00000469129 SLC38A10Q9HBR0 1119 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 FBXO28Q9NVF7 368 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 TMOD4Q9NZQ9 345 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 SCAF8Q9UPN6 1271 aaKnown RBP10.48□□□□□ -0.73
SMC1A-205ENST00000469129 NFE2L3Q9Y4A8 694 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMC1A-205ENST00000469129 ARID2Q68CP9 1835 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 EDIL3O43854 480 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 ZNF500O60304 480 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 TOMM70O94826 608 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 CLCN1P35523 988 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 CCT6AP40227 531 aaKnown RBP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 ASIC1P78348 528 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 SPP2Q13103 211 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 PAK1Q13153 545 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 SPATA1Q5VX52 437 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 CNNM4Q6P4Q7 775 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 SAMD1Q6SPF0 538 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 USP50Q70EL3 339 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 FCHSD1Q86WN1 690 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 CCDC150Q8NCX0 1101 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 ANKRD20A12PQ8NF67 263 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 ETNPPLQ8TBG4 499 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 STAMQ92783 540 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 CTAGE1Q96RT6 745 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 MMTAG2Q9BU76 263 aaKnown RBP10.47□□□□□ -0.73
SMC1A-205ENST00000469129 TRIM9Q9C026 710 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 EMILIN3Q9NT22 766 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 IFNKQ9P0W0 207 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 RWDD2AQ9UIY3 292 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 CTNND2Q9UQB3 1225 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 CSADQ9Y600 493 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 LRRC37A2A6NM11 1700 aa10.47□□□□□ -0.73
SMC1A-205ENST00000469129 PVALEFA0A1B0GWK0 134 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 BICDL2A1A5D9 508 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 PSMA7O14818 248 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 PPP1R12BO60237 982 aaPredicted RBP10.46□□□□□ -0.73
SMC1A-205ENST00000469129 CDK11BP21127 795 aaKnown RBP10.46□□□□□ -0.73
SMC1A-205ENST00000469129 IREB2P48200 963 aaKnown RBP10.46□□□□□ -0.73
SMC1A-205ENST00000469129 HIRAP54198 1017 aaPredicted RBP10.46□□□□□ -0.73
SMC1A-205ENST00000469129 TKFCQ3LXA3 575 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 KMT5BQ4FZB7 885 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 COBLL1Q53SF7 1204 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 NIPA1Q7RTP0 329 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 ZC3H15Q8WU90 426 aaKnown RBP10.46□□□□□ -0.73
SMC1A-205ENST00000469129 PNMA5Q96PV4 448 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 PLIN2Q99541 437 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 MTRQ99707 1265 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 WDR11Q9BZH6 1224 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 XPO4Q9C0E2 1151 aaKnown RBP10.46□□□□□ -0.73
SMC1A-205ENST00000469129 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.73
SMC1A-205ENST00000469129 FANCLQ9NW38 375 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 ZNF536O15090 1300 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 FRMPD4Q14CM0 1322 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 RPTORQ8N122 1335 aa10.46□□□□□ -0.73
SMC1A-205ENST00000469129 IGLV3-22A0A075B6J6 115 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 KLRC4O43908 158 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 ALAS1P13196 640 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 ZNF18P17022 549 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 MUTP22033 750 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 CASP1P29466 404 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 UBASH3AP57075 661 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 FMR1Q06787 632 aaKnown RBP eCLIP10.45□□□□□ -0.741e-9■■□□□ 11.8
SMC1A-205ENST00000469129 PDE4DQ08499 809 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 PSMD2Q13200 908 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 NCAPH2Q6IBW4 605 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 KLHL10Q6JEL2 608 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 UNC13DQ70J99 1090 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 CCDC186Q7Z3E2 898 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 TRMT44Q8IYL2 757 aaKnown RBP10.45□□□□□ -0.74
SMC1A-205ENST00000469129 GIMAP8Q8ND71 665 aaPredicted RBP10.45□□□□□ -0.74
SMC1A-205ENST00000469129 NEK9Q8TD19 979 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
SMC1A-205ENST00000469129 NELFBQ8WX92 580 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 ZKSCAN4Q969J2 545 aaPredicted RBP10.45□□□□□ -0.74
SMC1A-205ENST00000469129 LENG9Q96B70 501 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 DHTKD1Q96HY7 919 aaPredicted RBP10.45□□□□□ -0.74
SMC1A-205ENST00000469129 HSD3B7Q9H2F3 369 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 BLOC1S4Q9NUP1 217 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 ZHX2Q9Y6X8 837 aa10.45□□□□□ -0.74
SMC1A-205ENST00000469129 IQCA1LA6NCM1 817 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 FAM86B1E9PN63 330 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 VWA5AO00534 786 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 ATP2A1O14983 1001 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 MSH4O15457 936 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms