RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 PHKBQ93100 1093 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 LARP6Q9BRS8 491 aaKnown RBP16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 SLC26A6Q9BXS9 759 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 TPCN1Q9ULQ1 816 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 NR2E3Q9Y5X4 410 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 ESYT2A0FGR8 921 aa16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 SPDYE3A6NKU9 549 aa16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 DYNC1LI2O43237 492 aaPredicted RBP16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 FOSP01100 380 aaPredicted RBP16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 TXNP10599 105 aaKnown RBP16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 KCNA10Q16322 511 aa16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 PKN1Q16512 942 aa16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 BRDTQ58F21 947 aaPredicted RBP16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 SH3GLB2Q9NR46 395 aa16.98■□□□□ 0.31
TMEM39A-205ENST00000468676 EVI5O60447 810 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 DEXIO95424 95 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 TGFB3P10600 412 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 GNA11P29992 359 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 CPT1AP50416 773 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 ACLYP53396 1101 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 FSCN1Q16658 493 aaKnown RBP16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 PCNX4Q63HM2 1172 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 CCSAPQ6IQ19 270 aaPredicted RBP16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 CCDC62Q6P9F0 684 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 SEPT14Q6ZU15 432 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 CCDC148Q8NFR7 591 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 ZMYND12Q9H0C1 365 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 C6orf50Q9HD87 102 aa16.97■□□□□ 0.31
TMEM39A-205ENST00000468676 CABYRO75952 493 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 SCRN1Q12765 414 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 GNPTABQ3T906 1256 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 C1orf53Q5VUE5 145 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 OR6J1Q8NGC5 347 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 IL31RAQ8NI17 732 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 BICD2Q8TD16 824 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 PCDHA6Q9UN73 950 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 PCDHA8Q9Y5H6 950 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 MRVI1Q9Y6F6 885 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 CEP290O15078 2479 aa16.96■□□□□ 0.31
TMEM39A-205ENST00000468676 ELP1O95163 1332 aa16.96■□□□□ 0.3
TMEM39A-205ENST00000468676 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 CTAGE5O15320 804 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 KPNA6O60684 536 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 GH1P01241 217 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 ASGR1P07306 291 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 AP3B2Q13367 1082 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 RABEP1Q15276 862 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 UBE2SQ16763 222 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 SLC39A5Q6ZMH5 540 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 KIF2CQ99661 725 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 LIMCH1Q9UPQ0 1083 aa16.95■□□□□ 0.3
TMEM39A-205ENST00000468676 MYADML2A6NDP7 307 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 RGS20O76081 388 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 SNX17Q15036 470 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 LRRC26Q2I0M4 334 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 NLRX1Q86UT6 975 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 CDHR1Q96JP9 859 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 INPP4AQ96PE3 977 aaPredicted RBP16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 SEZ6LQ9BYH1 1024 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 STARD7Q9NQZ5 370 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 POLR3EQ9NVU0 708 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 DDX41Q9UJV9 622 aaKnown RBP16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 ALPK3Q96L96 1907 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 STK36Q9NRP7 1315 aa16.94■□□□□ 0.3
TMEM39A-205ENST00000468676 A6NJR5 290 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 ARIH2O95376 493 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 ICAM3P32942 547 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 CLK2P49760 499 aaKnown RBP16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 ATN1P54259 1190 aaPredicted RBP16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 BEX3Q00994 111 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 LAMC2Q13753 1193 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 ME3Q16798 604 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 LY6KQ17RY6 165 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 TMEM63BQ5T3F8 832 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 WASF1Q92558 559 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 EMID1Q96A84 441 aaPredicted RBP16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 VTI1AQ96AJ9 217 aa16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
TMEM39A-205ENST00000468676 MYH7BA7E2Y1 1941 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 FIBPO43427 364 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 XBP1P17861 261 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 RTP1P59025 263 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 NLRP5P59047 1200 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 ARHGAP1Q07960 439 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 GALNT17Q6IS24 598 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 DHX37Q8IY37 1157 aaKnown RBP16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 REXO1Q8N1G1 1221 aaKnown RBP16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 GPRASP2Q96D09 838 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms