RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 IGLV3-22A0A075B6J6 115 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 TBX3O15119 743 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 PGK2P07205 417 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 CCND2P30279 289 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 TOB1P50616 345 aaPredicted RBP12.84□□□□□ -0.35
MSH5-214ENST00000468602 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
MSH5-214ENST00000468602 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 PKP1Q13835 747 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 STXBP2Q15833 593 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 CEP55Q53EZ4 464 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 MAP3K21Q5TCX8 1036 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 ARHGEF16Q5VV41 709 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 JAKMIP3Q5VZ66 844 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 KCNV1Q6PIU1 500 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 RASGRP4Q8TDF6 673 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 LENG9Q96B70 501 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 GPRASP2Q96D09 838 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 ABHD16BQ9H3Z7 469 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 VTA1Q9NP79 307 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 TMEM260Q9NX78 707 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
MSH5-214ENST00000468602 LAD1O00515 517 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 RGS20O76081 388 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 SNAI1O95863 264 aaPredicted RBP12.83□□□□□ -0.36
MSH5-214ENST00000468602 BMP15O95972 392 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 NKX3-2P78367 333 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
MSH5-214ENST00000468602 PRKCZQ05513 592 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 PIK3AP1Q6ZUJ8 805 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 FCHSD1Q86WN1 690 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 CDHR1Q96JP9 859 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 SENP7Q9BQF6 1050 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 MXRA8Q9BRK3 442 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 JADE2Q9NQC1 790 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
MSH5-214ENST00000468602 POLR3EQ9NVU0 708 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
MSH5-214ENST00000468602 GABRQQ9UN88 632 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 MYH15Q9Y2K3 1946 aa12.83□□□□□ -0.36
MSH5-214ENST00000468602 MCM3APO60318 1980 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
MSH5-214ENST00000468602 CAPN2P17655 700 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 ITGB5P18084 799 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 NASPP49321 788 aaPredicted RBP12.82□□□□□ -0.36
MSH5-214ENST00000468602 INF2Q27J81 1249 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 WDR78Q5VTH9 848 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 C4orf32Q8N8J7 132 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 IL31RAQ8NI17 732 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 KCNMB3Q9NPA1 279 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 FLRT1Q9NZU1 646 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 PTPN22Q9Y2R2 807 aa12.82□□□□□ -0.36
MSH5-214ENST00000468602 SPATA31C2B4DYI2 1134 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 EIF2AK2P19525 551 aaKnown RBP12.81□□□□□ -0.36
MSH5-214ENST00000468602 PRPHP41219 470 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 GNPTABQ3T906 1256 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
MSH5-214ENST00000468602 TAPT1Q6NXT6 567 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 CCDC62Q6P9F0 684 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 B3GNT9Q6UX72 402 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 CTU1Q7Z7A3 348 aaKnown RBP12.81□□□□□ -0.36
MSH5-214ENST00000468602 NLRX1Q86UT6 975 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 SPRYD3Q8NCJ5 442 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 TRIB2Q92519 343 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 FAM20AQ96MK3 541 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
MSH5-214ENST00000468602 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.81□□□□□ -0.36
MSH5-214ENST00000468602 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 Q9Y3F1 56 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 NFASCO94856 1347 aa12.81□□□□□ -0.36
MSH5-214ENST00000468602 FAM205CA6NFA0 338 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 NKRFO15226 690 aaKnown RBP eCLIP12.8□□□□□ -0.36
MSH5-214ENST00000468602 FIBPO43427 364 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 HMGCRP04035 888 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 ZNF865P0CJ78 1059 aaPredicted RBP12.8□□□□□ -0.36
MSH5-214ENST00000468602 CYBAP13498 195 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 PDE4DQ08499 809 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 GNL2Q13823 731 aaKnown RBP12.8□□□□□ -0.36
MSH5-214ENST00000468602 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 MFSD14CQ5VZR4 134 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 MCTP1Q6DN14 999 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 GIMAP8Q8ND71 665 aaPredicted RBP12.8□□□□□ -0.36
MSH5-214ENST00000468602 ETNPPLQ8TBG4 499 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 EMID1Q96A84 441 aaPredicted RBP12.8□□□□□ -0.36
MSH5-214ENST00000468602 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
MSH5-214ENST00000468602 RIT2Q99578 217 aa12.8□□□□□ -0.36
MSH5-214ENST00000468602 ADCY3O60266 1144 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 YEATS4O95619 227 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 CYP2B6P20813 491 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 ATP2C1P98194 919 aaPredicted RBP12.79□□□□□ -0.36
MSH5-214ENST00000468602 SEMA3FQ13275 785 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms