RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	RPTOR	Q8N122	1335 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	KDM3A	Q9Y4C1	1321 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	IGLV3-22	A0A075B6J6	115 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	SPDYE5	A6NIY4	337 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	SMTNL1	A8MU46	457 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	IKBKB	O14920	756 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	MYL1	P05976	194 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	TPM4	P67936	248 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	UBXN2A	P68543	259 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	PPAT	Q06203	517 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	MOB2	Q70IA6	237 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	ARMC9	Q7Z3E5	817 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	ERO1B	Q86YB8	467 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	SAMD3	Q8N6K7	520 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	OTUD5	Q96G74	571 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	CLMN	Q96JQ2	1002 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	TRERF1	Q96PN7	1200 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	UIMC1	Q96RL1	719 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	RNF146	Q9NTX7	359 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	KBTBD4	Q9NVX7	518 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	RMND1	Q9NWS8	449 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	COL20A1	Q9P218	1284 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	ADAMTS5	Q9UNA0	930 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	LOXHD1	Q8IVV2	1947 aa		13.83	□□□□□ -0.2
HDLBP-231	ENST00000467435	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	MSH4	O15457	936 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	SLC26A4	O43511	780 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	RPN1	P04843	607 aa	Known RBP	13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	SET	Q01105	290 aa	Predicted RBP	13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	MYL5	Q02045	173 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	TMEM119	Q4V9L6	283 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	TREML2	Q5T2D2	321 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	SNRNP48	Q6IEG0	339 aa	Known RBP	13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	SARM1	Q6SZW1	724 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	SLC30A10	Q6XR72	485 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	GADL1	Q6ZQY3	521 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	FAM20A	Q96MK3	541 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	MAP3K20	Q9NYL2	800 aa	Known RBP	13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	CLEC11A	Q9Y240	323 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435	FRMPD4	Q14CM0	1322 aa		13.82	□□□□□ -0.2
HDLBP-231	ENST00000467435		A0A0G2JLL6	359 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	CCT6A	P40227	531 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	STAT3	P40763	770 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	PPIL2	Q13356	520 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	TMEM132B	Q14DG7	1078 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	NCAPH	Q15003	741 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	HAUS3	Q68CZ6	603 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	NCAPH2	Q6IBW4	605 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	RNF207	Q6ZRF8	634 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	PLA2G4D	Q86XP0	818 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	ERMN	Q8TAM6	284 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	CYP2W1	Q8TAV3	490 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	NUDT12	Q9BQG2	462 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	TRIM5	Q9C035	493 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	BLOC1S4	Q9NUP1	217 aa		13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	ZNF214	Q9UL59	606 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-231	ENST00000467435	IRF6	O14896	467 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	ATP2A1	O14983	1001 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	PTMA	P06454	111 aa	Known RBP	13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	POTEI	P0CG38	1075 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	POTEJ	P0CG39	1038 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	ZNF75D	P51815	510 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	RPS6	P62753	249 aa	Known RBP	13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	AMPD3	Q01432	767 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	SPIRE1	Q08AE8	756 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	TKFC	Q3LXA3	575 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	CEP55	Q53EZ4	464 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	HYI	Q5T013	277 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	NSMF	Q6X4W1	530 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	LARP4B	Q92615	738 aa	Known RBP	13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	RAD54L	Q92698	747 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	TEX13B	Q9BXU2	312 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	NT5C3A	Q9H0P0	336 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	HOXC10	Q9NYD6	342 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	VAV3	Q9UKW4	847 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	KCNH4	Q9UQ05	1017 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	RIPK3	Q9Y572	518 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	STK24	Q9Y6E0	443 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	LRRC37A2	A6NM11	1700 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	SYNRG	Q9UMZ2	1314 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	KIAA1217	Q5T5P2	1943 aa		13.8	□□□□□ -0.2
HDLBP-231	ENST00000467435	CXCL11	O14625	94 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	ASIC1	P78348	528 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	FMR1	Q06787	632 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	1e-7	■□□□□ 9.8
HDLBP-231	ENST00000467435	DHX8	Q14562	1220 aa	Known RBP	13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	MCM6	Q14566	821 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	PLS1	Q14651	629 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	KCNB1	Q14721	858 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	KMT5B	Q4FZB7	885 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	LRCH2	Q5VUJ6	765 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	PCNX4	Q63HM2	1172 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	MAP1S	Q66K74	1059 aa	Predicted RBP	13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	SV2B	Q7L1I2	683 aa		13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	TRMT44	Q8IYL2	757 aa	Known RBP	13.79	□□□□□ -0.2
HDLBP-231	ENST00000467435	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.79	□□□□□ -0.2

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