RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
PTCD3-207ENST00000467273 BRI3BPQ8WY22 251 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 OPTNQ96CV9 577 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 DMRTB1Q96MA1 342 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 CDC5LQ99459 802 aaKnown RBP6.98□□□□□ -1.29
PTCD3-207ENST00000467273 GDF15Q99988 308 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 MTMR10Q9NXD2 777 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 SPTBN5Q9NRC6 3674 aaKnown RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 CCL15-CCL14A0A0B4J2E2 113 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 USP2O75604 605 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 FARP2O94887 1054 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 TIAF1O95411 115 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 ANXA1P04083 346 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 PCCAP05165 728 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 CETPP11597 493 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 CCL5P13501 91 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 CCT4P50991 539 aaKnown RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 FKBP1AP62942 108 aaKnown RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 EHHADHQ08426 723 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 PLCL1Q15111 1095 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 CCL15Q16663 113 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 SPOCD1Q6ZMY3 1216 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 ZAR1Q86SH2 424 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 KIAA0825Q8IV33 1275 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 GJD3Q8N144 294 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 CCDC191Q8NCU4 936 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 SMG8Q8ND04 991 aaKnown RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 PLEKHF1Q96S99 279 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 TMPRSS13Q9BYE2 586 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 NIF3L1Q9GZT8 377 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 HYPKQ9NX55 129 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 TMEM63CQ9P1W3 806 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 DBF4Q9UBU7 674 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-207ENST00000467273 SRRDQ9UH36 339 aa6.97□□□□□ -1.29
PTCD3-207ENST00000467273 PDE2AO00408 941 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-207ENST00000467273 SGPL1O95470 568 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 MAPK8P45983 427 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 LMOD3Q0VAK6 560 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 NBPF12Q5TAG4 269 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-207ENST00000467273 FAM109BQ6ICB4 259 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-207ENST00000467273 ZNF438Q7Z4V0 828 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 RAET1EQ8TD07 263 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 U2AF1L4Q8WU68 220 aaKnown RBP6.96□□□□□ -1.3
PTCD3-207ENST00000467273 HHIPQ96QV1 700 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 YIPF2Q9BWQ6 316 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 ELP3Q9H9T3 547 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 PRKAG2Q9UGJ0 569 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 FZD1Q9UP38 647 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 RIPOR2Q9Y4F9 1068 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 FAM205AQ6ZU69 1335 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 MAPK8IP3Q9UPT6 1336 aa6.96□□□□□ -1.3
PTCD3-207ENST00000467273 LOC100289279A0A1B0GTE1 492 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 A6NHS1 94 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 BIN1O00499 593 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 PPP2R1AP30153 589 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 USP5P45974 858 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 IKBKEQ14164 716 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 RASA3Q14644 834 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 DUSP27Q5VZP5 1158 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 C17orf99Q6UX52 265 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 TDHQ8IZJ6 230 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 FAM43AQ8N2R8 423 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 MXD3Q9BW11 206 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 ANKRD2Q9GZV1 360 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 CHPF2Q9P2E5 772 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 STAP2Q9UGK3 403 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 ZC3H7BQ9UGR2 993 aaKnown RBP6.95□□□□□ -1.3
PTCD3-207ENST00000467273 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 MINPP1Q9UNW1 487 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 CSADQ9Y600 493 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-207ENST00000467273 MUC3AQ02505 3323 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 MYH3P11055 1940 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 ADGRA2Q96PE1 1338 aa6.95□□□□□ -1.3
PTCD3-207ENST00000467273 LAMA2P24043 3122 aaKnown RBP6.94□□□□□ -1.3
PTCD3-207ENST00000467273 PRUNE2Q8WUY3 3088 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 ARAP2Q8WZ64 1704 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 PSMC4P43686 418 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 CTSWP56202 376 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 SNAPC2Q13487 334 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 VGLL4Q14135 290 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 ERO1BQ86YB8 467 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 C2CD4AQ8NCU7 369 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-207ENST00000467273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTCD3-207ENST00000467273 ALKBH8Q96BT7 664 aaKnown RBP6.94□□□□□ -1.3
PTCD3-207ENST00000467273 HOOK2Q96ED9 719 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 ARHGAP39Q9C0H5 1083 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 CNTN3Q9P232 1028 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-207ENST00000467273 EYSQ5T1H1 3165 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 MYPNQ86TC9 1320 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 RPTORQ8N122 1335 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 ZSWIM8A7E2V4 1837 aa6.94□□□□□ -1.3
PTCD3-207ENST00000467273 DLGAP3O95886 979 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 LDHBP07195 334 aaKnown RBP6.93□□□□□ -1.3
PTCD3-207ENST00000467273 PCSK2P16519 638 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 CES1P23141 567 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms