RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ADAMTS17Q8TE56 1095 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 BORCS6Q96GS4 357 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 APBA2Q99767 749 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 GPRC5CQ9NQ84 441 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 CLEC1BQ9P126 229 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 MYRFQ9Y2G1 1151 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 NPHP3-ACAD11A0A0J9YXS1 232 aa6.62□□□□□ -1.35
SMC4-207ENST00000467263 AMPD2Q01433 879 aa6.62□□□□□ -1.35
SMC4-207ENST00000467263 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
SMC4-207ENST00000467263 USP33Q8TEY7 942 aa6.62□□□□□ -1.35
SMC4-207ENST00000467263 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
SMC4-207ENST00000467263 NTMQ9P121 344 aa6.62□□□□□ -1.35
SMC4-207ENST00000467263 CNOT11Q9UKZ1 510 aaKnown RBP6.62□□□□□ -1.35
SMC4-207ENST00000467263 AKT3Q9Y243 479 aa6.62□□□□□ -1.35
SMC4-207ENST00000467263 SUSD5O60279 629 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 KCNH1O95259 989 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 PAMP19021 973 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 TNFRSF1AP19438 455 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 SLC9A5Q14940 896 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 DDR2Q16832 855 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 SV2CQ496J9 727 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 CKAP2LQ8IYA6 745 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 RCC1LQ96I51 464 aaKnown RBP6.61□□□□□ -1.35
SMC4-207ENST00000467263 TRIM55Q9BYV6 548 aa6.61□□□□□ -1.35
SMC4-207ENST00000467263 SGSM2O43147 1006 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 NAT2P11245 290 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 PLS3P13797 630 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 ZNF143P52747 638 aaPredicted RBP6.6□□□□□ -1.35
SMC4-207ENST00000467263 CYP4F3Q08477 520 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 RAB33AQ14088 237 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 INF2Q27J81 1249 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 TBC1D10BQ4KMP7 808 aaPredicted RBP6.6□□□□□ -1.35
SMC4-207ENST00000467263 TEX2Q8IWB9 1127 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 BVESQ8NE79 360 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 C11orf84Q9BUA3 381 aaPredicted RBP6.6□□□□□ -1.35
SMC4-207ENST00000467263 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMC4-207ENST00000467263 MARCH2Q9P0N8 246 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 NUDT5Q9UKK9 219 aa6.6□□□□□ -1.35
SMC4-207ENST00000467263 MATN3O15232 486 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 CYP2C8P10632 490 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 THBS2P35442 1172 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 GRB10Q13322 594 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 COPS5Q92905 334 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 C8orf49Q96NF6 230 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 LRP2BPQ9P2M1 347 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 EMC9Q9Y3B6 208 aa6.59□□□□□ -1.35
SMC4-207ENST00000467263 ARNTLO00327 626 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 NOP56O00567 594 aaKnown RBP6.58□□□□□ -1.36
SMC4-207ENST00000467263 TBX1O43435 398 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 AKAP8O43823 692 aaKnown RBP6.58□□□□□ -1.36
SMC4-207ENST00000467263 NPHS1O60500 1241 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 ZBTB7AO95365 584 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 SCRN1Q12765 414 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 RGL3Q3MIN7 710 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 POMZP3Q6PJE2 187 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 TTLL7Q6ZT98 887 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 EEPD1Q7L9B9 569 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 SSBP3Q9BWW4 388 aaPredicted RBP6.58□□□□□ -1.36
SMC4-207ENST00000467263 BTG4Q9NY30 223 aa6.58□□□□□ -1.36
SMC4-207ENST00000467263 ITGAVP06756 1048 aa6.57□□□□□ -1.36
SMC4-207ENST00000467263 RPL13P26373 211 aaKnown RBP6.57□□□□□ -1.36
SMC4-207ENST00000467263 ZXDAP98168 799 aa6.57□□□□□ -1.36
SMC4-207ENST00000467263 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
SMC4-207ENST00000467263 TRIM59Q8IWR1 403 aa6.57□□□□□ -1.36
SMC4-207ENST00000467263 MRGPRX3Q96LB0 322 aa6.57□□□□□ -1.36
SMC4-207ENST00000467263 PALD1Q9ULE6 856 aa6.57□□□□□ -1.36
SMC4-207ENST00000467263 INVSQ9Y283 1065 aa6.57□□□□□ -1.36
SMC4-207ENST00000467263 CCDC85CA6NKD9 419 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 U2SURPO15042 1029 aaKnown RBP6.56□□□□□ -1.36
SMC4-207ENST00000467263 SMARCA5O60264 1052 aaPredicted RBP6.56□□□□□ -1.36
SMC4-207ENST00000467263 PLATP00750 562 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 THBDP07204 575 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 ZNF20P17024 532 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 FPR2P25090 351 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 STAT5AP42229 794 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 ITGA1P56199 1179 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 SLC10A6Q3KNW5 377 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 PRR31Q5SQ13 230 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 GTF2IRD2BQ6EKJ0 949 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 CD300LDQ6UXZ3 194 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 LIMS2Q7Z4I7 341 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 GTF2IRD2Q86UP8 949 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 ZNF227Q86WZ6 799 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 CRACR2BQ8N4Y2 399 aaPredicted RBP6.56□□□□□ -1.36
SMC4-207ENST00000467263 BTN2A2Q8WVV5 523 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 LOXL4Q96JB6 756 aa6.56□□□□□ -1.36
SMC4-207ENST00000467263 SF3A1Q15459 793 aaKnown RBP6.55□□□□□ -1.36
SMC4-207ENST00000467263 ETV3LQ6ZN32 361 aa6.55□□□□□ -1.36
SMC4-207ENST00000467263 MIB1Q86YT6 1006 aa6.55□□□□□ -1.36
SMC4-207ENST00000467263 KYQ8NBH2 561 aa6.55□□□□□ -1.36
SMC4-207ENST00000467263 FRS2Q8WU20 508 aa6.55□□□□□ -1.36
SMC4-207ENST00000467263 MMP19Q99542 508 aa6.55□□□□□ -1.36
SMC4-207ENST00000467263 TMEFF2Q9UIK5 374 aaPredicted RBP6.55□□□□□ -1.36
SMC4-207ENST00000467263 ST6GALNAC2Q9UJ37 374 aa6.55□□□□□ -1.36
SMC4-207ENST00000467263 C22orf46C9J442 243 aa6.54□□□□□ -1.36
SMC4-207ENST00000467263 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMC4-207ENST00000467263 CPZQ66K79 652 aa6.54□□□□□ -1.36
SMC4-207ENST00000467263 NLRP10Q86W26 655 aa6.54□□□□□ -1.36
SMC4-207ENST00000467263 CCDC103Q8IW40 242 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms