RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 HSPD1P10809 573 aaKnown RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 CASTP20810 708 aaKnown RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 ERVK-21P61565 698 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 CCDC178Q5BJE1 867 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 TMEM31Q5JXX7 168 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 MFSD6Q6ZSS7 791 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 SYTL5Q8TDW5 730 aaPredicted RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 EMID1Q96A84 441 aaPredicted RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 KATNAL1Q9BW62 490 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 RNF41Q9H4P4 317 aaPredicted RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 GTF2IRD1Q9UHL9 959 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 A0A0D9SFI3 127 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 LCHNA4D1U4 455 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 DEFB103AP81534 67 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 STXBP2Q15833 593 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 DGKDQ16760 1214 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 USH1GQ495M9 461 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 DGKHQ86XP1 1220 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 MCF2L2Q86YR7 1114 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 NSUN6Q8TEA1 469 aaKnown RBP10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 FAM227BQ96M60 508 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 TGS1Q96RS0 853 aaKnown RBP10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 RAD9AQ99638 391 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 ZBED2Q9BTP6 218 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 CCDC171Q6TFL3 1326 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 TRANK1O15050 2925 aa10.48□□□□□ -0.73
PTPDC1-203ENST00000467049 HAS3O00219 553 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 GPR37L1O60883 481 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 NBNO60934 754 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 GJB5O95377 273 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 CKBP12277 381 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 PSEN2P49810 448 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 PDE1AP54750 535 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 HAND2P61296 217 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 PTK7Q13308 1070 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 TRIM71Q2Q1W2 868 aaKnown RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 SEPT14Q6ZU15 432 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 SPRED2Q7Z698 418 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 TBC1D10CQ8IV04 446 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 GDPD5Q8WTR4 605 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 ANKS1AQ92625 1134 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 ESR2Q92731 530 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 TAAR1Q96RJ0 339 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 HDAC6Q9UBN7 1215 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 COL4A6Q14031 1691 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 BDP1A6H8Y1 2624 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 F2P00734 622 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 MFAP1P55081 439 aaKnown RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 CHMP4BP1P59074 171 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 NMIQ13287 307 aaPredicted RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 LY6KQ17RY6 165 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 ASPRV1Q53RT3 343 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 ZNF589Q86UQ0 364 aaPredicted RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 SUGCTQ9HAC7 445 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 MRPL11Q9Y3B7 192 aaKnown RBP10.47□□□□□ -0.73
PTPDC1-203ENST00000467049 LINC01553A4QN01 128 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 PI4K2BG5E9Z4 385 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 GHRHRQ02643 423 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 IKBKEQ14164 716 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 MFSD10Q14728 455 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 TCTN1Q2MV58 587 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 LEXMQ3ZCV2 418 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 C7orf31Q8N865 590 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 PPTC7Q8NI37 304 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 TBC1D5Q92609 795 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 RMDN3Q96TC7 470 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 UBA5Q9GZZ9 404 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 UBE2ZQ9H832 354 aaPredicted RBP10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 NEDD4P46934 1319 aa10.46□□□□□ -0.74
PTPDC1-203ENST00000467049 ATG2AQ2TAZ0 1938 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 LGR5O75473 907 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 ADGRF4Q8IZF3 695 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 CPVLQ9H3G5 476 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 C11orf16Q9NQ32 467 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 PXMP2Q9NR77 195 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 KAT6AQ92794 2004 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 EMSYQ7Z589 1322 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 REV3LO60673 3130 aa10.45□□□□□ -0.74
PTPDC1-203ENST00000467049 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
PTPDC1-203ENST00000467049 KIAA0753Q2KHM9 967 aa10.44□□□□□ -0.74
PTPDC1-203ENST00000467049 QRICH1Q2TAL8 776 aa10.44□□□□□ -0.74
PTPDC1-203ENST00000467049 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
PTPDC1-203ENST00000467049 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
PTPDC1-203ENST00000467049 CHST3Q7LGC8 479 aa10.44□□□□□ -0.74
PTPDC1-203ENST00000467049 TMCO2Q7Z6W1 182 aaPredicted RBP10.44□□□□□ -0.74
PTPDC1-203ENST00000467049 FBXO11Q86XK2 927 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms