RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ZFYVE26Q68DK2 2539 aa15.21■□□□□ 0.03
UBR4-210ENST00000466969 NAV1Q8NEY1 1877 aa15.21■□□□□ 0.03
UBR4-210ENST00000466969 PI15O43692 258 aa15.21■□□□□ 0.03
UBR4-210ENST00000466969 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
UBR4-210ENST00000466969 CCDC158Q5M9N0 1113 aa15.21■□□□□ 0.03
UBR4-210ENST00000466969 MYH8P13535 1937 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 A6NJR5 290 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 LMNB2Q03252 620 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 MBTPS1Q14703 1052 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 NEK1Q96PY6 1258 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 PLVAPQ9BX97 442 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 SMOC2Q9H3U7 446 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 PIH1D3Q9NQM4 214 aaKnown RBP15.2■□□□□ 0.02
UBR4-210ENST00000466969 NCDNQ9UBB6 729 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
UBR4-210ENST00000466969 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.2■□□□□ 0.02
UBR4-210ENST00000466969 PTPRCP08575 1304 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 NKRFO15226 690 aaKnown RBP eCLIP15.19■□□□□ 0.02
UBR4-210ENST00000466969 PTK7Q13308 1070 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 CAMK1Q14012 370 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 DYNLL2Q96FJ2 89 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 TLE6Q9H808 572 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 RNF146Q9NTX7 359 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 ANGPTL2Q9UKU9 493 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 PLAGL2Q9UPG8 496 aa15.19■□□□□ 0.02
UBR4-210ENST00000466969 MYO5AQ9Y4I1 1855 aaKnown RBP15.18■□□□□ 0.02
UBR4-210ENST00000466969 ZAP70P43403 619 aa15.18■□□□□ 0.02
UBR4-210ENST00000466969 PPP2R5BQ15173 497 aa15.18■□□□□ 0.02
UBR4-210ENST00000466969 PLEKHG4Q58EX7 1191 aa15.18■□□□□ 0.02
UBR4-210ENST00000466969 PPM1JQ5JR12 505 aa15.18■□□□□ 0.02
UBR4-210ENST00000466969 TRAF7Q6Q0C0 670 aa15.18■□□□□ 0.02
UBR4-210ENST00000466969 RIN2Q8WYP3 895 aaPredicted RBP15.18■□□□□ 0.02
UBR4-210ENST00000466969 SEPT8Q92599 483 aa15.18■□□□□ 0.02
UBR4-210ENST00000466969 CRNKL1Q9BZJ0 848 aaKnown RBP15.18■□□□□ 0.02
UBR4-210ENST00000466969 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
UBR4-210ENST00000466969 FSD2A1L4K1 749 aa15.17■□□□□ 0.02
UBR4-210ENST00000466969 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
UBR4-210ENST00000466969 SRGAP2BP0DMP2 458 aa15.17■□□□□ 0.02
UBR4-210ENST00000466969 C7orf31Q8N865 590 aa15.17■□□□□ 0.02
UBR4-210ENST00000466969 MORC4Q8TE76 937 aa15.17■□□□□ 0.02
UBR4-210ENST00000466969 CLP1Q92989 425 aaKnown RBP15.17■□□□□ 0.02
UBR4-210ENST00000466969 ADGRA3Q8IWK6 1321 aa15.17■□□□□ 0.02
UBR4-210ENST00000466969 RBM47A0AV96 593 aaKnown RBP15.16■□□□□ 0.02
UBR4-210ENST00000466969 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 F5H6K3 240 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 LINC00271P0C7V0 271 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 CYP2D6P10635 497 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 PDE4BQ07343 736 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 KLRC3Q07444 240 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 VARS2Q5ST30 1063 aaKnown RBP15.16■□□□□ 0.02
UBR4-210ENST00000466969 LRRC47Q8N1G4 583 aaKnown RBP15.16■□□□□ 0.02
UBR4-210ENST00000466969 SECISBP2LQ93073 1101 aaKnown RBP15.16■□□□□ 0.02
UBR4-210ENST00000466969 P2RX5Q93086 422 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 TRERF1Q96PN7 1200 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 FEM1BQ9UK73 627 aa15.16■□□□□ 0.02
UBR4-210ENST00000466969 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.15■□□□□ 0.02
UBR4-210ENST00000466969 KINO60870 393 aaKnown RBP15.15■□□□□ 0.02
UBR4-210ENST00000466969 FDX1P10109 184 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 NPR3P17342 541 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 DNAJB1P25685 340 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 ZNF200P98182 395 aaPredicted RBP15.15■□□□□ 0.02
UBR4-210ENST00000466969 TRIM71Q2Q1W2 868 aaKnown RBP15.15■□□□□ 0.02
UBR4-210ENST00000466969 TKFCQ3LXA3 575 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 NAALADL2Q58DX5 795 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 WDR63Q8IWG1 891 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 SUMF1Q8NBK3 374 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 RIOK1Q9BRS2 568 aaKnown RBP15.15■□□□□ 0.02
UBR4-210ENST00000466969 GPR108Q9NPR9 543 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 CYP39A1Q9NYL5 469 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 HDAC6Q9UBN7 1215 aa15.15■□□□□ 0.02
UBR4-210ENST00000466969 ADD3Q9UEY8 706 aaKnown RBP15.15■□□□□ 0.02
UBR4-210ENST00000466969 C2CD4DB7Z1M9 353 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 STK25O00506 426 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 NDUFB10O96000 172 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 ASGR2P07307 311 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 ALAS1P13196 640 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 CDK8P49336 464 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 BTG3Q14201 252 aaPredicted RBP15.14■□□□□ 0.01
UBR4-210ENST00000466969 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
UBR4-210ENST00000466969 CRIPAKQ8N1N5 446 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 SPPL3Q8TCT6 385 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 MICAL1Q8TDZ2 1067 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 POF1BQ8WVV4 589 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 COPS5Q92905 334 aa15.14■□□□□ 0.01
UBR4-210ENST00000466969 PER2O15055 1255 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 SRGAP3O43295 1099 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 ITGB1P05556 798 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 ARP10275 920 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 THPOP40225 353 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 RBM10P98175 930 aaKnown RBP15.13■□□□□ 0.01
UBR4-210ENST00000466969 NSMFQ6X4W1 530 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 ATP8B4Q8TF62 1192 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 SCFD2Q8WU76 684 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 WNT8BQ93098 351 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 CDCA3Q99618 268 aaPredicted RBP15.13■□□□□ 0.01
UBR4-210ENST00000466969 APOL5Q9BWW9 433 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 S1PR5Q9H228 398 aa15.13■□□□□ 0.01
UBR4-210ENST00000466969 DCP1AQ9NPI6 582 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms