RNA–Protein interactions for RNA: ENST00000466638.5

PNCK-222, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,204 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-222	ENST00000466638	NKRF	O15226	690 aa	Known RBP eCLIP	18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	ARIH2	O95376	493 aa		18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	ASGR1	P07306	291 aa		18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	ACLY	P53396	1101 aa		18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	NKX3-2	P78367	333 aa		18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	PRPF38B	Q5VTL8	546 aa	Known RBP	18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	SLC39A5	Q6ZMH5	540 aa		18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	VSIG10L	Q86VR7	867 aa		18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	RNF26	Q9BY78	433 aa	Predicted RBP	18.97	■□□□□ 0.63
PNCK-222	ENST00000466638	KIAA1217	Q5T5P2	1943 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	SMCO2	A6NFE2	343 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	ADCY7	P51828	1080 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	PKN1	Q16512	942 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	OR6J1	Q8NGC5	347 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	COPS5	Q92905	334 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	ZFP91	Q96JP5	570 aa	Predicted RBP	18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	C22orf23	Q9BZE7	217 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	SLK	Q9H2G2	1235 aa	Predicted RBP	18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	RIC8A	Q9NPQ8	531 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	MRVI1	Q9Y6F6	885 aa		18.96	■□□□□ 0.63
PNCK-222	ENST00000466638	SPDYE3	A6NKU9	549 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638		H0YGN5	161 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	ZEB2	O60315	1214 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	RTP1	P59025	263 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	SSRP1	Q08945	709 aa	Known RBP	18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	SCRN1	Q12765	414 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	LY6K	Q17RY6	165 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	CCDC62	Q6P9F0	684 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	CPLX2	Q6PUV4	134 aa	Known RBP	18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	TRIM22	Q8IYM9	498 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	STARD7	Q9NQZ5	370 aa		18.95	■□□□□ 0.62
PNCK-222	ENST00000466638	PFKFB2	O60825	505 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	RGS20	O76081	388 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	MRPS9	P82933	396 aa	Known RBP	18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	SNX17	Q15036	470 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	PCNX4	Q63HM2	1172 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	VTI1A	Q96AJ9	217 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	GLT1D1	Q96MS3	346 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	GLT8D2	Q9H1C3	349 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	PCDHA6	Q9UN73	950 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	ATP11B	Q9Y2G3	1177 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	PCDHA8	Q9Y5H6	950 aa		18.94	■□□□□ 0.62
PNCK-222	ENST00000466638	STAM2	O75886	525 aa		18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	GH1	P01241	217 aa		18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	CPT1A	P50416	773 aa		18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	KCNV1	Q6PIU1	500 aa		18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	TEX2	Q8IWB9	1127 aa		18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	EHMT1	Q9H9B1	1298 aa		18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	UPF2	Q9HAU5	1272 aa	Known RBP	18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	RTEL1	Q9NZ71	1219 aa		18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	DDX41	Q9UJV9	622 aa	Known RBP	18.93	■□□□□ 0.62
PNCK-222	ENST00000466638	ESYT2	A0FGR8	921 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	CDKL5	O76039	1030 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	RBM25	P49756	843 aa	Known RBP	18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	ARHGAP1	Q07960	439 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	GNPTAB	Q3T906	1256 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	TRIM60	Q495X7	471 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	BRDT	Q58F21	947 aa	Predicted RBP	18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	C1orf53	Q5VUE5	145 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	XRRA1	Q6P2D8	792 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	CXCL17	Q6UXB2	119 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	PGBD1	Q96JS3	809 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	KIF2C	Q99661	725 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	ZMYND12	Q9H0C1	365 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	C6orf50	Q9HD87	102 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	ELP1	O95163	1332 aa		18.92	■□□□□ 0.62
PNCK-222	ENST00000466638	DEXI	O95424	95 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	LARGE1	O95461	756 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	FOS	P01100	380 aa	Predicted RBP	18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	MYL3	P08590	195 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	ME3	Q16798	604 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	CCDC148	Q8NFR7	591 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	INPP4A	Q96PE3	977 aa	Predicted RBP	18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	ANO3	Q9BYT9	981 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	POLR3E	Q9NVU0	708 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	TMEM260	Q9NX78	707 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638	VPS54	Q9P1Q0	977 aa		18.91	■□□□□ 0.62
PNCK-222	ENST00000466638		A0A0U1RQG5	324 aa	Predicted RBP	18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	CABYR	O75952	493 aa		18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	TGFB3	P10600	412 aa		18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	SYN1	P17600	705 aa		18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	CLK2	P49760	499 aa	Known RBP	18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	AP3B2	Q13367	1082 aa		18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	NECAB1	Q8N987	351 aa		18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	AFG1L	Q8WV93	481 aa		18.9	■□□□□ 0.62
PNCK-222	ENST00000466638	SH3GLB2	Q9NR46	395 aa		18.9	■□□□□ 0.62
PNCK-222	ENST00000466638		A6NJR5	290 aa		18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	FIBP	O43427	364 aa		18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	SORBS3	O60504	671 aa		18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	PQBP1	O60828	265 aa	Known RBP	18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	UBA1	P22314	1058 aa	Known RBP	18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	GNA11	P29992	359 aa		18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	PURA	Q00577	322 aa	Known RBP	18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	SP2	Q02086	613 aa		18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	JAKMIP3	Q5VZ66	844 aa		18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	DHX37	Q8IY37	1157 aa	Known RBP	18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	GTF3C6	Q969F1	213 aa		18.89	■□□□□ 0.61
PNCK-222	ENST00000466638	SPATA31C2	B4DYI2	1134 aa		18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms