RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 DCXO43602 365 aa17.04■□□□□ 0.32
CXCR4-203ENST00000466288 EFCAB14O75071 495 aa17.04■□□□□ 0.32
CXCR4-203ENST00000466288 ARHGAP1Q07960 439 aa17.04■□□□□ 0.32
CXCR4-203ENST00000466288 IKBKEQ14164 716 aa17.04■□□□□ 0.32
CXCR4-203ENST00000466288 PUS10Q3MIT2 529 aaKnown RBP17.04■□□□□ 0.32
CXCR4-203ENST00000466288 KCNH6Q9H252 994 aa17.04■□□□□ 0.32
CXCR4-203ENST00000466288 GPCPD1Q9NPB8 672 aa17.04■□□□□ 0.32
CXCR4-203ENST00000466288 H3BQ06 376 aaPredicted RBP17.03■□□□□ 0.32
CXCR4-203ENST00000466288 RANBP6O60518 1105 aaKnown RBP17.03■□□□□ 0.32
CXCR4-203ENST00000466288 MBTPS1Q14703 1052 aa17.03■□□□□ 0.32
CXCR4-203ENST00000466288 TRIM71Q2Q1W2 868 aaKnown RBP17.03■□□□□ 0.32
CXCR4-203ENST00000466288 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
CXCR4-203ENST00000466288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
CXCR4-203ENST00000466288 FBXO22Q8NEZ5 403 aa17.03■□□□□ 0.32
CXCR4-203ENST00000466288 MRPL38Q96DV4 380 aaKnown RBP17.03■□□□□ 0.32
CXCR4-203ENST00000466288 TMEM47Q9BQJ4 181 aa17.03■□□□□ 0.32
CXCR4-203ENST00000466288 CHMP4BQ9H444 224 aaKnown RBP17.03■□□□□ 0.32
CXCR4-203ENST00000466288 HDAC6Q9UBN7 1215 aa17.03■□□□□ 0.32
CXCR4-203ENST00000466288 PNMA2Q9UL42 364 aa17.03■□□□□ 0.32
CXCR4-203ENST00000466288 INSL6Q9Y581 213 aa17.03■□□□□ 0.32
CXCR4-203ENST00000466288 FGRP09769 529 aa17.02■□□□□ 0.32
CXCR4-203ENST00000466288 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
CXCR4-203ENST00000466288 LY6KQ17RY6 165 aa17.02■□□□□ 0.32
CXCR4-203ENST00000466288 WNT8BQ93098 351 aa17.02■□□□□ 0.32
CXCR4-203ENST00000466288 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
CXCR4-203ENST00000466288 ANAPC4Q9UJX5 808 aa17.02■□□□□ 0.32
CXCR4-203ENST00000466288 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.31
CXCR4-203ENST00000466288 B4DLN1 442 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 ORC4O43929 436 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 GH1P01241 217 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 PDHBP11177 359 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
CXCR4-203ENST00000466288 CASTP20810 708 aaKnown RBP17.01■□□□□ 0.31
CXCR4-203ENST00000466288 MRPL12P52815 198 aaKnown RBP17.01■□□□□ 0.31
CXCR4-203ENST00000466288 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
CXCR4-203ENST00000466288 ZP2Q05996 745 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 PTK7Q13308 1070 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 COL19A1Q14993 1142 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
CXCR4-203ENST00000466288 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
CXCR4-203ENST00000466288 TRIP12Q14669 1992 aaPredicted RBP17.01■□□□□ 0.31
CXCR4-203ENST00000466288 C19orf67A6NJJ6 358 aa17■□□□□ 0.31
CXCR4-203ENST00000466288 EPC2Q52LR7 807 aa17■□□□□ 0.31
CXCR4-203ENST00000466288 ZNF618Q5T7W0 954 aa17■□□□□ 0.31
CXCR4-203ENST00000466288 CHST3Q7LGC8 479 aa17■□□□□ 0.31
CXCR4-203ENST00000466288 C7orf31Q8N865 590 aa17■□□□□ 0.31
CXCR4-203ENST00000466288 PABPC5Q96DU9 382 aaKnown RBP17■□□□□ 0.31
CXCR4-203ENST00000466288 LGR5O75473 907 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 PSEN2P49810 448 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 DGKDQ16760 1214 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 PTPROQ16827 1216 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 VPS53Q5VIR6 699 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 SEPT14Q6ZU15 432 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 BANK1Q8NDB2 785 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 PI4K2BQ8TCG2 481 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 SNX27Q96L92 541 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 PRKAG3Q9UGI9 489 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 SIP14410 1827 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 HAS3O00219 553 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 F2P00734 622 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 ZNF543Q08ER8 600 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 TIGD5Q53EQ6 642 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 TCEAL5Q5H9L2 206 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 HFE2Q6ZVN8 426 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 MYOCDQ8IZQ8 938 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 DBF4BQ8NFT6 615 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
CXCR4-203ENST00000466288 CFAP54Q96N23 3096 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 H3BNC9 293 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 AMHP03971 560 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 SNHG28P0DPA3 235 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 ZNF200P98182 395 aaPredicted RBP16.98■□□□□ 0.31
CXCR4-203ENST00000466288 HIC1Q14526 733 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 MFSD10Q14728 455 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 KIAA0753Q2KHM9 967 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 ADHFE1Q8IWW8 467 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 EMID1Q96A84 441 aaPredicted RBP16.98■□□□□ 0.31
CXCR4-203ENST00000466288 SAMD11Q96NU1 681 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 TAAR1Q96RJ0 339 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 KATNAL1Q9BW62 490 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 COL20A1Q9P218 1284 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 DDX41Q9UJV9 622 aaKnown RBP16.98■□□□□ 0.31
CXCR4-203ENST00000466288 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
CXCR4-203ENST00000466288 USH1GQ495M9 461 aa16.97■□□□□ 0.31
CXCR4-203ENST00000466288 SYTL5Q8TDW5 730 aaPredicted RBP16.97■□□□□ 0.31
CXCR4-203ENST00000466288 FAM50BQ9Y247 325 aa16.97■□□□□ 0.31
CXCR4-203ENST00000466288 EMSYQ7Z589 1322 aa16.96■□□□□ 0.31
CXCR4-203ENST00000466288 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
CXCR4-203ENST00000466288 IRS1P35568 1242 aa16.96■□□□□ 0.31
CXCR4-203ENST00000466288 LTBRP36941 435 aa16.96■□□□□ 0.31
CXCR4-203ENST00000466288 GPM6BQ13491 265 aa16.96■□□□□ 0.31
CXCR4-203ENST00000466288 STXBP2Q15833 593 aa16.96■□□□□ 0.31
CXCR4-203ENST00000466288 PLEKHG4Q58EX7 1191 aa16.96■□□□□ 0.31
CXCR4-203ENST00000466288 PPTC7Q8NI37 304 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms