RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 MUC3AQ02505 3323 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 METTL12A8MUP2 240 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 PAX4O43316 350 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 DRD2P14416 443 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 IGHMBP2P38935 993 aaKnown RBP7.51□□□□□ -1.21
NCL-208ENST00000466274 PEAR1Q5VY43 1037 aaPredicted RBP7.51□□□□□ -1.21
NCL-208ENST00000466274 PHLDB3Q6NSJ2 640 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 FASTKD5Q7L8L6 764 aaKnown RBP7.51□□□□□ -1.21
NCL-208ENST00000466274 CCDC82Q8N4S0 544 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 FBXL6Q8N531 539 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 SNX29Q8TEQ0 813 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 ZKSCAN4Q969J2 545 aaPredicted RBP7.51□□□□□ -1.21
NCL-208ENST00000466274 TEPSINQ96N21 525 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 LRFN3Q9BTN0 628 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 CD209Q9NNX6 404 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 ANO2Q9NQ90 1003 aa7.51□□□□□ -1.21
NCL-208ENST00000466274 SCN9AQ15858 1988 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 TCP10L2B9ZVM9 353 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 CXCL11O14625 94 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 FAM13AO94988 1023 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 TIAF1O95411 115 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 WNT11O96014 354 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 PCCAP05165 728 aaPredicted RBP7.5□□□□□ -1.21
NCL-208ENST00000466274 POLR3DP05423 398 aaPredicted RBP7.5□□□□□ -1.21
NCL-208ENST00000466274 ESRRAP11474 423 aaPredicted RBP7.5□□□□□ -1.21
NCL-208ENST00000466274 AAK1Q2M2I8 961 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 AKNAD1Q5T1N1 836 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 SHISA5Q8N114 240 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 SMG8Q8ND04 991 aaKnown RBP7.5□□□□□ -1.21
NCL-208ENST00000466274 SMCR8Q8TEV9 937 aaPredicted RBP7.5□□□□□ -1.21
NCL-208ENST00000466274 BHLHE41Q9C0J9 482 aaPredicted RBP7.5□□□□□ -1.21
NCL-208ENST00000466274 TMEM39BQ9GZU3 492 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 TMOD2Q9NZR1 351 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 PCDHAC2Q9Y5I4 1007 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 PFASO15067 1338 aa7.5□□□□□ -1.21
NCL-208ENST00000466274 ABL1P00519 1130 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 CYP2C8P10632 490 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 COL6A1P12109 1028 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 MRE11P49959 708 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 GSTM4Q03013 218 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 EHHADHQ08426 723 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 SHHQ15465 462 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 LRRC26Q2I0M4 334 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 ZNF804AQ7Z570 1209 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 CERS5Q8N5B7 392 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 USP38Q8NB14 1042 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 CCDC191Q8NCU4 936 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 PPM1EQ8WY54 764 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 MPHOSPH8Q99549 860 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 ZNF341Q9BYN7 854 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 PNNQ9H307 717 aaKnown RBP7.49□□□□□ -1.21
NCL-208ENST00000466274 TDRD3Q9H7E2 651 aaKnown RBP7.49□□□□□ -1.21
NCL-208ENST00000466274 SUGCTQ9HAC7 445 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 CYP4F12Q9HCS2 524 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 DBF4Q9UBU7 674 aaPredicted RBP7.49□□□□□ -1.21
NCL-208ENST00000466274 TIMELESSQ9UNS1 1208 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 SLC45A1Q9Y2W3 748 aa7.49□□□□□ -1.21
NCL-208ENST00000466274 COL3A1P02461 1466 aaPredicted RBP7.49□□□□□ -1.21
NCL-208ENST00000466274 PIEZO1Q92508 2521 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 F13BP05160 661 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 TAF1P21675 1872 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 USP5P45974 858 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 CTSWP56202 376 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 ZNF211Q13398 564 aaPredicted RBP7.48□□□□□ -1.21
NCL-208ENST00000466274 PDE3AQ14432 1141 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 EXOSC6Q5RKV6 272 aaKnown RBP7.48□□□□□ -1.21
NCL-208ENST00000466274 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 FBLIM1Q8WUP2 373 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 SOX17Q9H6I2 414 aaPredicted RBP7.48□□□□□ -1.21
NCL-208ENST00000466274 HYPKQ9NX55 129 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 GTF3C3Q9Y5Q9 886 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 LAMB4A4D0S4 1761 aa7.48□□□□□ -1.21
NCL-208ENST00000466274 FAM95CA0A1B0GW59 222 aa7.47□□□□□ -1.21
NCL-208ENST00000466274 HSPA5P11021 654 aaKnown RBP7.47□□□□□ -1.21
NCL-208ENST00000466274 IL1R1P14778 569 aa7.47□□□□□ -1.21
NCL-208ENST00000466274 USP11P51784 963 aa7.47□□□□□ -1.21
NCL-208ENST00000466274 NFKBIBQ15653 356 aa7.47□□□□□ -1.21
NCL-208ENST00000466274 GJD3Q8N144 294 aa7.47□□□□□ -1.21
NCL-208ENST00000466274 CWC25Q9NXE8 425 aaPredicted RBP7.47□□□□□ -1.21
NCL-208ENST00000466274 CHPF2Q9P2E5 772 aa7.47□□□□□ -1.21
NCL-208ENST00000466274 TTF2Q9UNY4 1162 aaKnown RBP7.47□□□□□ -1.21
NCL-208ENST00000466274 EYSQ5T1H1 3165 aa7.47□□□□□ -1.21
NCL-208ENST00000466274 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.21
NCL-208ENST00000466274 LAMB1P07942 1786 aa7.46□□□□□ -1.21
NCL-208ENST00000466274 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.46□□□□□ -1.22
NCL-208ENST00000466274 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.46□□□□□ -1.22
NCL-208ENST00000466274 CNGB1Q14028 1251 aaPredicted RBP7.46□□□□□ -1.22
NCL-208ENST00000466274 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
NCL-208ENST00000466274 FAM110CQ1W6H9 321 aa7.46□□□□□ -1.22
NCL-208ENST00000466274 C9orf50Q5SZB4 431 aa7.46□□□□□ -1.22
NCL-208ENST00000466274 C15orf52Q6ZUT6 534 aaKnown RBP7.46□□□□□ -1.22
NCL-208ENST00000466274 FAM83AQ86UY5 434 aa7.46□□□□□ -1.22
NCL-208ENST00000466274 ANKRD13CQ8N6S4 541 aa7.46□□□□□ -1.22
NCL-208ENST00000466274 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
NCL-208ENST00000466274 RNPC3Q96LT9 517 aaKnown RBP7.46□□□□□ -1.22
NCL-208ENST00000466274 SENP6Q9GZR1 1112 aaPredicted RBP7.46□□□□□ -1.22
NCL-208ENST00000466274 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
NCL-208ENST00000466274 HOXB7P09629 217 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 KLRK1P26718 216 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 TXKP42681 527 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms