RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 TDRD12Q587J7 1177 aaKnown RBP18.19■□□□□ 0.5
SLX4-202ENST00000466154 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
SLX4-202ENST00000466154 DNAJC7Q99615 494 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 COA1Q9GZY4 146 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 PCDHA1Q9Y5I3 950 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 NAV1Q8NEY1 1877 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 A0A1W2PQC6 194 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 RASSF10A6NK89 507 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 SHMT1P34896 483 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 MIIPQ5JXC2 388 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
SLX4-202ENST00000466154 MTMR9Q96QG7 549 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 NDST4Q9H3R1 872 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 QTRT2Q9H974 415 aaKnown RBP18.19■□□□□ 0.5
SLX4-202ENST00000466154 MEIS1O00470 390 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 MRPL12P52815 198 aaKnown RBP18.18■□□□□ 0.5
SLX4-202ENST00000466154 NEK11Q8NG66 645 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 RAD54LQ92698 747 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 HAUS4Q9H6D7 363 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 PDE11AQ9HCR9 933 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 POTEB3A0JP26 581 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 POTECB2RU33 542 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 ZBED6P86452 979 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 APBA1Q02410 837 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 POTEBQ6S5H4 581 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 SPICE1Q8N0Z3 855 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 FAM163AQ96GL9 167 aaPredicted RBP18.18■□□□□ 0.5
SLX4-202ENST00000466154 MAGEF1Q9HAY2 307 aa18.18■□□□□ 0.5
SLX4-202ENST00000466154 KIF5AQ12840 1032 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 UNC13DQ70J99 1090 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 TRERF1Q96PN7 1200 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 FUT8Q9BYC5 575 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 SAR1BQ9Y6B6 198 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 CXCR5P32302 372 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 VWA3BQ502W6 1294 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 HERC4Q5GLZ8 1057 aaPredicted RBP18.17■□□□□ 0.5
SLX4-202ENST00000466154 MMS19Q96T76 1030 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 FGFBP2Q9BYJ0 223 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 FAM53CQ9NYF3 392 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 EEF2P13639 858 aaKnown RBP18.17■□□□□ 0.5
SLX4-202ENST00000466154 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 CRAMP1Q96RY5 1269 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 MLXIPQ9HAP2 919 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 PANK4Q9NVE7 773 aa18.17■□□□□ 0.5
SLX4-202ENST00000466154 ZBTB5O15062 677 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 EDIL3O43854 480 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 ERLIN1O75477 346 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 GABPAQ06546 454 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 QRICH1Q2TAL8 776 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 GSPT2Q8IYD1 628 aaKnown RBP18.16■□□□□ 0.5
SLX4-202ENST00000466154 ZFP91Q96JP5 570 aaPredicted RBP18.16■□□□□ 0.5
SLX4-202ENST00000466154 TSG101Q99816 390 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
SLX4-202ENST00000466154 UTRNP46939 3433 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 CCDC151A5D8V7 595 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 VGLL3A8MV65 326 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 KIF20AO95235 890 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 CRKP46108 304 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 SEPT2Q15019 361 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 WHAMMP3Q1A5X7 153 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 PRR16Q569H4 304 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 SLC30A10Q6XR72 485 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 NUP58Q9BVL2 599 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
SLX4-202ENST00000466154 PLEKHA4Q9H4M7 779 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 RIC8AQ9NPQ8 531 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 DDX60LQ5H9U9 1706 aaKnown RBP18.16■□□□□ 0.5
SLX4-202ENST00000466154 MAST2Q6P0Q8 1798 aa18.16■□□□□ 0.5
SLX4-202ENST00000466154 LRRC53A6NM62 1247 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 N4BP1O75113 896 aaKnown RBP18.15■□□□□ 0.5
SLX4-202ENST00000466154 EIF4A3P38919 411 aaKnown RBP18.15■□□□□ 0.5
SLX4-202ENST00000466154 FAM193AP78312 1265 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 CERKLQ49MI3 558 aaPredicted RBP18.15■□□□□ 0.5
SLX4-202ENST00000466154 HAS1Q92839 578 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 DDTLA6NHG4 134 aaPredicted RBP18.15■□□□□ 0.5
SLX4-202ENST00000466154 MOCS3O95396 460 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 MMP10P09238 476 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 FECHP22830 423 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 EPS15P42566 896 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 VPS18Q9P253 973 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 STK17AQ9UEE5 414 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 SBF2Q86WG5 1849 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 HOXA13P31271 388 aaPredicted RBP18.15■□□□□ 0.5
SLX4-202ENST00000466154 CYP4A11Q02928 519 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 COASYQ13057 564 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 SLFN13Q68D06 897 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 APOBEC3HQ6NTF7 200 aaKnown RBP18.15■□□□□ 0.5
SLX4-202ENST00000466154 GPBP1Q86WP2 473 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 MYOCDQ8IZQ8 938 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 SMARCAL1Q9NZC9 954 aa18.15■□□□□ 0.5
SLX4-202ENST00000466154 TRPC5Q9UL62 973 aaPredicted RBP18.15■□□□□ 0.5
SLX4-202ENST00000466154 COL24A1Q17RW2 1714 aa18.14■□□□□ 0.5
SLX4-202ENST00000466154 ESYT2A0FGR8 921 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 POTEFA5A3E0 1075 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 H3BQF6 201 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 BUB1O43683 1085 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 POTEIP0CG38 1075 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 FXR2P51116 673 aaKnown RBP eCLIP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms