RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 ZNF792Q3KQV3 632 aa11.01□□□□□ -0.65
ATG3-203ENST00000465980 GMCL1P1Q8NEA9 526 aa11.01□□□□□ -0.65
ATG3-203ENST00000465980 MKL1Q969V6 931 aa11.01□□□□□ -0.65
ATG3-203ENST00000465980 LENG1Q96BZ8 264 aaPredicted RBP11.01□□□□□ -0.65
ATG3-203ENST00000465980 DDX11Q96FC9 970 aa11.01□□□□□ -0.65
ATG3-203ENST00000465980 IPO9Q96P70 1041 aaKnown RBP11.01□□□□□ -0.65
ATG3-203ENST00000465980 TINF2Q9BSI4 451 aa11.01□□□□□ -0.65
ATG3-203ENST00000465980 TM6SF1Q9BZW5 370 aa11.01□□□□□ -0.65
ATG3-203ENST00000465980 LRRC37A2A6NM11 1700 aa11.01□□□□□ -0.65
ATG3-203ENST00000465980 CFAP99D6REC4 459 aa11□□□□□ -0.65
ATG3-203ENST00000465980 CYP21A2P08686 494 aa11□□□□□ -0.65
ATG3-203ENST00000465980 WDR4P57081 412 aaKnown RBP11□□□□□ -0.65
ATG3-203ENST00000465980 RTP1P59025 263 aa11□□□□□ -0.65
ATG3-203ENST00000465980 SNAP25P60880 206 aa11□□□□□ -0.65
ATG3-203ENST00000465980 KRT32Q14532 448 aa11□□□□□ -0.65
ATG3-203ENST00000465980 LRRC41Q15345 812 aa11□□□□□ -0.65
ATG3-203ENST00000465980 IMMTQ16891 758 aaKnown RBP11□□□□□ -0.65
ATG3-203ENST00000465980 KCTD1Q719H9 257 aa11□□□□□ -0.65
ATG3-203ENST00000465980 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
ATG3-203ENST00000465980 ZSCAN1Q8NBB4 408 aa11□□□□□ -0.65
ATG3-203ENST00000465980 ARRDC4Q8NCT1 418 aa11□□□□□ -0.65
ATG3-203ENST00000465980 SNX21Q969T3 373 aa11□□□□□ -0.65
ATG3-203ENST00000465980 FERMT2Q96AC1 680 aa11□□□□□ -0.65
ATG3-203ENST00000465980 GDF15Q99988 308 aa11□□□□□ -0.65
ATG3-203ENST00000465980 KLF16Q9BXK1 252 aaPredicted RBP11□□□□□ -0.65
ATG3-203ENST00000465980 UBE2OQ9C0C9 1292 aaKnown RBP11□□□□□ -0.65
ATG3-203ENST00000465980 SLC38A10Q9HBR0 1119 aa11□□□□□ -0.65
ATG3-203ENST00000465980 ATP11BQ9Y2G3 1177 aa11□□□□□ -0.65
ATG3-203ENST00000465980 CUL9Q8IWT3 2517 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 ZNF213O14771 459 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 PGK1P00558 417 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 RARBP10826 455 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 PSMA5P28066 241 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 ADCYAP1R1P41586 468 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 SLC1A4P43007 532 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 STAT2P52630 851 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 BECN1Q14457 450 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 CCDC96Q2M329 555 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 ADCK5Q3MIX3 580 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 CCDC174Q6PII3 467 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 ANKRD35Q8N283 1001 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 XPNPEP3Q9NQH7 507 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 IL17RBQ9NRM6 502 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 ANAPC4Q9UJX5 808 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 ZHX1Q9UKY1 873 aaPredicted RBP10.99□□□□□ -0.65
ATG3-203ENST00000465980 SYNPO2Q9UMS6 1093 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 CNPY2Q9Y2B0 182 aa10.99□□□□□ -0.65
ATG3-203ENST00000465980 BAZ2BQ9UIF8 2168 aaKnown RBP10.99□□□□□ -0.65
ATG3-203ENST00000465980 A0A1W2PPC1 479 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 ORC4O43929 436 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 LORP23490 312 aaPredicted RBP10.98□□□□□ -0.65
ATG3-203ENST00000465980 NEK4P51957 841 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 FAM160B2Q86V87 743 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 CHURC1Q8WUH1 139 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 GMCL1Q96IK5 515 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 AGBL1Q96MI9 1066 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 JAKMIP1Q96N16 626 aaKnown RBP10.98□□□□□ -0.65
ATG3-203ENST00000465980 RNF146Q9NTX7 359 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 DIS3Q9Y2L1 958 aaKnown RBP10.98□□□□□ -0.65
ATG3-203ENST00000465980 TAF6LQ9Y6J9 622 aa10.98□□□□□ -0.65
ATG3-203ENST00000465980 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 E7EWF7 191 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 ATP2A1O14983 1001 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 ZNF865P0CJ78 1059 aaPredicted RBP10.97□□□□□ -0.65
ATG3-203ENST00000465980 ALAS1P13196 640 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 CASTP20810 708 aaKnown RBP10.97□□□□□ -0.65
ATG3-203ENST00000465980 CNTN2Q02246 1040 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 NR5A1Q13285 461 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 SLC39A5Q6ZMH5 540 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 RUFY3Q7L099 469 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 TBC1D10CQ8IV04 446 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 CHST13Q8NET6 341 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 STAG1Q8WVM7 1258 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 FGD4Q96M96 766 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 NEK1Q96PY6 1258 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 LBHD1Q9BQE6 289 aaPredicted RBP10.97□□□□□ -0.65
ATG3-203ENST00000465980 UPF3BQ9BZI7 483 aaKnown RBP10.97□□□□□ -0.65
ATG3-203ENST00000465980 ACAD9Q9H845 621 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 PRDM5Q9NQX1 630 aaPredicted RBP10.97□□□□□ -0.65
ATG3-203ENST00000465980 FBXO40Q9UH90 709 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 NRBP1Q9UHY1 535 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 CYP46A1Q9Y6A2 500 aa10.97□□□□□ -0.65
ATG3-203ENST00000465980 ZNF536O15090 1300 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 FRMPD2Q68DX3 1309 aaPredicted RBP10.96□□□□□ -0.65
ATG3-203ENST00000465980 SYNGAP1Q96PV0 1343 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 SNAI1O95863 264 aaPredicted RBP10.96□□□□□ -0.65
ATG3-203ENST00000465980 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.65
ATG3-203ENST00000465980 AKR1A1P14550 325 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 BMP8BP34820 402 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 SLC16A2P36021 539 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 RCSD1Q6JBY9 416 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 BLOC1S2Q6QNY1 142 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 HSCBQ8IWL3 235 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 TDHQ8IZJ6 230 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 FOXJ1Q92949 421 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 TTC14Q96N46 770 aa10.96□□□□□ -0.65
ATG3-203ENST00000465980 PURBQ96QR8 312 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms