RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CHRM1P11229 460 aaPredicted RBP8.07□□□□□ -1.12
USP48-206ENST00000464577 IGHMBP2P38935 993 aaKnown RBP8.07□□□□□ -1.12
USP48-206ENST00000464577 CARSP49589 748 aaKnown RBP8.07□□□□□ -1.12
USP48-206ENST00000464577 ATP1A2P50993 1020 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 STK4Q13043 487 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 CCDC178Q5BJE1 867 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 C6orf89Q6UWU4 347 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 GPATCH11Q8N954 259 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 PIGBQ92521 554 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 SYN2Q92777 582 aaPredicted RBP8.07□□□□□ -1.12
USP48-206ENST00000464577 MTMR8Q96EF0 704 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 CCT8L2Q96SF2 557 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 NUCKS1Q9H1E3 243 aaKnown RBP8.07□□□□□ -1.12
USP48-206ENST00000464577 SEMA6BQ9H3T3 888 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 LUC7LQ9NQ29 371 aaKnown RBP8.07□□□□□ -1.12
USP48-206ENST00000464577 PLCB1Q9NQ66 1216 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 PRDM11Q9NQV5 511 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 TCP11L1Q9NUJ3 509 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 SMARCAL1Q9NZC9 954 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 EHD2Q9NZN4 543 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 SALL4Q9UJQ4 1053 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 NFU1Q9UMS0 254 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 PCDHA6Q9UN73 950 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 PCDHA8Q9Y5H6 950 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 KIAA1551Q9HCM1 1747 aa8.07□□□□□ -1.12
USP48-206ENST00000464577 BAZ2AQ9UIF9 1905 aaKnown RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 LRRC53A6NM62 1247 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 MYO1FO00160 1098 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 EPHB6O15197 1021 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 KIF1CO43896 1103 aaKnown RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 RASSF9O75901 435 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 OR52Z1P0C646 297 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 FAM153BP0C7A2 387 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 CCDC172P0C7W6 258 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 PRKAR2AP13861 404 aaKnown RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 VEGFAP15692 232 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 CXCR5P32302 372 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 IL6STP40189 918 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 GNAQP50148 359 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 GUCY1A3Q02108 690 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 GUCY2DQ02846 1103 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 ITGB3BPQ13352 177 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 ORC2Q13416 577 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 CDC37Q16543 378 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 FAM153CQ494X1 144 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 CCDC152Q4G0S7 254 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 KIAA0895Q8NCT3 520 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 CASKIN2Q8WXE0 1202 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 INPP4AQ96PE3 977 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 HINFPQ9BQA5 517 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 TMBIM4Q9HC24 238 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 FAM153AQ9UHL3 310 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 PVALEFA0A1B0GWK0 134 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 TMCO5BA8MYB1 307 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 FCER1AP12319 257 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 DYNLL1P63167 89 aaKnown RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 TNNC1P63316 161 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 MRPS25P82663 173 aaKnown RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 LRRC63Q05C16 580 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 GRM4Q14833 912 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 PREPLQ4J6C6 727 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 SBK1Q52WX2 424 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 HGSNATQ68CP4 663 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 KCTD16Q68DU8 428 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 RCSD1Q6JBY9 416 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 RRAGAQ7L523 313 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 TAX1BP1Q86VP1 789 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 DZIP3Q86Y13 1208 aaKnown RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 GUF1Q8N442 669 aaKnown RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 EPB41L5Q9HCM4 733 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 FAM207AQ9NSI2 230 aaPredicted RBP8.06□□□□□ -1.12
USP48-206ENST00000464577 DONSONQ9NYP3 566 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 ZBTB1Q9Y2K1 713 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 PCDHGC5Q9Y5F6 944 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 MAST2Q6P0Q8 1798 aa8.06□□□□□ -1.12
USP48-206ENST00000464577 ITGB4P16144 1822 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 PHLPP1O60346 1717 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 GOLGA6L10A6NI86 522 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 USP17L12C9JPN9 530 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 BHMG1C9JSJ3 638 aaPredicted RBP8.05□□□□□ -1.12
USP48-206ENST00000464577 USP17L21D6R901 530 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 NMT2O60551 498 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 SERPING1P05155 500 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 RDXP35241 583 aaKnown RBP8.05□□□□□ -1.12
USP48-206ENST00000464577 SLC1A4P43007 532 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 HDLBPQ00341 1268 aaKnown RBP8.05□□□□□ -1.12
USP48-206ENST00000464577 RASSF7Q02833 373 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 CHRNDQ07001 517 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 BIRC3Q13489 604 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 CUL1Q13616 776 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 NEDD9Q14511 834 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 NAB2Q15742 525 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 INF2Q27J81 1249 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 SLC9C1Q4G0N8 1177 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 CCDC40Q4G0X9 1142 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 MEI1Q5TIA1 1274 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 UNC13DQ70J99 1090 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 DGKHQ86XP1 1220 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 CCDC50Q8IVM0 306 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms