RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 ADD2P35612 726 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 VEGFBP49765 207 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 CTDSPL2Q05D32 466 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 NR5A1Q13285 461 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 KCNB1Q14721 858 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 UBE3CQ15386 1083 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 GKAP1Q5VSY0 366 aaPredicted RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 PDXDC2PQ6P474 469 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 TTLL7Q6ZT98 887 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 MOV10L1Q9BXT6 1211 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 CFAP73A6NFT4 308 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 CASP1P29466 404 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 GUCY1A2P33402 732 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 KRT2P35908 639 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 PPP1R2P41236 205 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 PRCPP42785 496 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 CARSP49589 748 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 RGS19P49795 217 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 ELF3P78545 371 aaPredicted RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 CCT6BQ92526 530 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 LRRC45Q96CN5 670 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 SENP2Q9HC62 589 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 EPB41L5Q9HCM4 733 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 PPANQ9NQ55 473 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 LRWD1Q9UFC0 647 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 SLC12A6Q9UHW9 1150 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 NFU1Q9UMS0 254 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 TFR2Q9UP52 801 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 LEMD3Q9Y2U8 911 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
TNRC6A-205ENST00000464539 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 ZPR1O75312 459 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 HEXIM1O94992 359 aaKnown RBP12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 HSPA8P11142 646 aaKnown RBP12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 MATR3P43243 847 aaKnown RBP eCLIP12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 ATP2C1P98194 919 aaPredicted RBP12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 CENPTQ96BT3 561 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 SAAL1Q96ER3 474 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 DHTKD1Q96HY7 919 aaPredicted RBP12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 ERGIC2Q96RQ1 377 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 NOD2Q9HC29 1040 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 VPS54Q9P1Q0 977 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 PLAGL2Q9UPG8 496 aa12.71□□□□□ -0.37
TNRC6A-205ENST00000464539 PASKQ96RG2 1323 aa12.71□□□□□ -0.38
TNRC6A-205ENST00000464539 TMEM88BA6NKF7 163 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 GLI1P08151 1106 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 ZAP70P43403 619 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 CCNHP51946 323 aaPredicted RBP12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 RWDD2BP57060 319 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 CABP4P57796 275 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 PPARAQ07869 468 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 BIRC2Q13490 618 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 ERFEQ4G0M1 354 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 TATDN2Q93075 761 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 HVCN1Q96D96 273 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 CNOT10Q9H9A5 744 aaKnown RBP12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 SLC24A3Q9HC58 644 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 RBM12Q9NTZ6 932 aaKnown RBP12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 AGPAT5Q9NUQ2 364 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 CWC25Q9NXE8 425 aaPredicted RBP12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 ZSWIM5Q9P217 1185 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 PLAAQ9Y263 795 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 PSMA7O14818 248 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 ORC4O43929 436 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 FAM153BP0C7A2 387 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 GCKP35557 465 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 PPP2R2AP63151 447 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 GUCY2DQ02846 1103 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 MTMR3Q13615 1198 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 CUL1Q13616 776 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 E2F5Q15329 346 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 FAM153CQ494X1 144 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 MAATS1Q7Z4T9 603 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 ANKRD27Q96NW4 1050 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 NOX5Q96PH1 765 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 SPAG5Q96R06 1193 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 TAF1DQ9H5J8 278 aaPredicted RBP12.7□□□□□ -0.38
TNRC6A-205ENST00000464539 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms