RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 CCDC65Q8IXS2 484 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 NOA1Q8NC60 698 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 DDX54Q8TDD1 881 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF473Q8WTR7 871 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 MAIP1Q8WWC4 291 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 KIFC2Q96AC6 838 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 RUNDC1Q96C34 613 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 PRRX2Q99811 253 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 IRF2BPLQ9H1B7 796 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 INCENPQ9NQS7 918 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 ABCF2Q9UG63 623 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 GOLGA6L9A6NEM1 432 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 F8VZ95 297 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CEP104O60308 925 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 LARGE1O95461 756 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 SERPINC1P01008 464 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 GNRH1P01148 92 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC175P0C221 793 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 MYCLP1P12525 358 aaPredicted RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 ATP5JP18859 108 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 ALDH3A1P30838 453 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 KIF5BP33176 963 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 AK2P54819 239 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 IFFO1Q0D2I5 559 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CBX3Q13185 183 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 PLCB4Q15147 1175 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CFAP100Q494V2 611 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 HSP90AA4PQ58FG1 418 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF569Q5MCW4 686 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CEP128Q6ZU80 1094 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 TRIM50Q86XT4 487 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 SPATS2Q86XZ4 545 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 NECAB1Q8N987 351 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 MSANTD4Q8NCY6 345 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 SNIP1Q8TAD8 396 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 USP33Q8TEY7 942 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 SNRNP27Q8WVK2 155 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 ARHGAP45Q92619 1136 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 FOXJ1Q92949 421 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 ABTB1Q969K4 478 aaPredicted RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 CFAP53Q96M91 514 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 SEC62Q99442 399 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 CORO1BQ9BR76 489 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 MTA3Q9BTC8 594 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 PIM2Q9P1W9 311 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 PAIP2BQ9ULR5 123 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF510Q9Y2H8 683 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 N6AMT1Q9Y5N5 214 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 USH1CQ9Y6N9 552 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 SBNO2Q9Y2G9 1366 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CNTNAP4Q9C0A0 1308 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 TNFRSF10AO00220 468 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 DNM1LO00429 736 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 BACH1O14867 736 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 LDHAP00338 332 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 RPL13P26373 211 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 AARSP49588 968 aaKnown RBP eCLIP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SMCPP49901 116 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TUBP50607 506 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 INHBCP55103 352 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 DMPKQ09013 629 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 G3BP1Q13283 466 aaKnown RBP eCLIP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 BLMHQ13867 455 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TAF11Q15544 211 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 NCAPH2Q6IBW4 605 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC148Q8NFR7 591 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 FAM174AQ8TBP5 190 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 MAGEC3Q8TD91 643 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 FTOQ9C0B1 505 aaKnown RBP eCLIP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 RRAGCQ9HB90 399 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 PPANQ9NQ55 473 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CWC25Q9NXE8 425 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 NOP53Q9NZM5 478 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SWAP70Q9UH65 585 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF777Q9ULD5 760 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TCHHQ07283 1943 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 EIF3FO00303 357 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 KIF5CO60282 957 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 HNRNPCP07910 306 aaKnown RBP eCLIP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 FAM200BP0CF97 657 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TOP1P11387 765 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SCTRP47872 440 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 GNAQP50148 359 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 BPIFB4P59827 614 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 APBA1Q02410 837 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 MAP3K12Q12852 859 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 P3H1Q32P28 736 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SMUG1Q53HV7 270 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 RNF220Q5VTB9 566 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 USP50Q70EL3 339 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 WDR75Q8IWA0 830 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC170Q8IYT3 715 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CRIPAKQ8N1N5 446 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ARHGAP18Q8N392 663 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 NME8Q8N427 588 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CXorf38Q8TB03 319 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 COG1Q8WTW3 980 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 LEO1Q8WVC0 666 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 OPTNQ96CV9 577 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 DTNBP1Q96EV8 351 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms