RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ZNF618Q5T7W0 954 aa16.09■□□□□ 0.17
C9orf3-211ENST00000463372 ADGRD2Q7Z7M1 963 aa16.09■□□□□ 0.17
C9orf3-211ENST00000463372 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
C9orf3-211ENST00000463372 WDR63Q8IWG1 891 aa16.09■□□□□ 0.17
C9orf3-211ENST00000463372 CRNKL1Q9BZJ0 848 aaKnown RBP16.09■□□□□ 0.17
C9orf3-211ENST00000463372 NR2E1Q9Y466 385 aa16.09■□□□□ 0.17
C9orf3-211ENST00000463372 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
C9orf3-211ENST00000463372 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
C9orf3-211ENST00000463372 GCN1Q92616 2671 aaKnown RBP16.09■□□□□ 0.17
C9orf3-211ENST00000463372 DCDC2BA2VCK2 349 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 NKRFO15226 690 aaKnown RBP eCLIP16.08■□□□□ 0.164e-9■■□□□ 12.2
C9orf3-211ENST00000463372 GLP2RO95838 553 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 AOC1P19801 751 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 MBTPS1Q14703 1052 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 RTP3Q9BQQ7 232 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 RTKNQ9BST9 563 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 TSHZ2Q9NRE2 1034 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 RNF146Q9NTX7 359 aa16.08■□□□□ 0.16
C9orf3-211ENST00000463372 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
C9orf3-211ENST00000463372 SOBPA7XYQ1 873 aa16.07■□□□□ 0.16
C9orf3-211ENST00000463372 PTK7Q13308 1070 aa16.07■□□□□ 0.16
C9orf3-211ENST00000463372 PPP2R5BQ15173 497 aa16.07■□□□□ 0.16
C9orf3-211ENST00000463372 CWF19L1Q69YN2 538 aaKnown RBP16.07■□□□□ 0.16
C9orf3-211ENST00000463372 GPR161Q8N6U8 529 aaKnown RBP16.07■□□□□ 0.16
C9orf3-211ENST00000463372 PLVAPQ9BX97 442 aa16.07■□□□□ 0.16
C9orf3-211ENST00000463372 MAGEB6P1A0A0J9YX57 407 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 PRR5-ARHGAP8B1AHC4 643 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 PI15O43692 258 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 CYP2D6P10635 497 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 ARHGAP8P85298 464 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 CAMK1Q14012 370 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 PLEKHG4Q58EX7 1191 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 TRAF7Q6Q0C0 670 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 SEPT8Q92599 483 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 SMOC2Q9H3U7 446 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
C9orf3-211ENST00000463372 MAST4O15021 2626 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 F5H6K3 240 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 SRGAP3O43295 1099 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 KLRC3Q07444 240 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 TMED8Q6PL24 325 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-211ENST00000463372 MRPL50Q8N5N7 158 aaKnown RBP16.05■□□□□ 0.16
C9orf3-211ENST00000463372 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 TRERF1Q96PN7 1200 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 NEK1Q96PY6 1258 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 RIOK1Q9BRS2 568 aaKnown RBP16.05■□□□□ 0.16
C9orf3-211ENST00000463372 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 FEM1BQ9UK73 627 aa16.05■□□□□ 0.16
C9orf3-211ENST00000463372 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 RBM47A0AV96 593 aaKnown RBP16.04■□□□□ 0.16
C9orf3-211ENST00000463372 NDUFB10O96000 172 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 LINC00271P0C7V0 271 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 FDX1P10109 184 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 CDK8P49336 464 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 PDE4BQ07343 736 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 TKFCQ3LXA3 575 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 LRRC47Q8N1G4 583 aaKnown RBP16.04■□□□□ 0.16
C9orf3-211ENST00000463372 CLP1Q92989 425 aaKnown RBP16.04■□□□□ 0.16
C9orf3-211ENST00000463372 TLE6Q9H808 572 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 CYP39A1Q9NYL5 469 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 NCDNQ9UBB6 729 aa16.04■□□□□ 0.16
C9orf3-211ENST00000463372 ADD3Q9UEY8 706 aaKnown RBP16.04■□□□□ 0.16
C9orf3-211ENST00000463372 KIAA1671Q9BY89 1806 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 SRGAP2BP0DMP2 458 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 ALAS1P13196 640 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 LMNB2Q03252 620 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 TRIM71Q2Q1W2 868 aaKnown RBP16.03■□□□□ 0.16
C9orf3-211ENST00000463372 SDR42E1Q8WUS8 393 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 P2RX5Q93086 422 aa16.03■□□□□ 0.16
C9orf3-211ENST00000463372 ZNF512BQ96KM6 892 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-211ENST00000463372 DCP1AQ9NPI6 582 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-211ENST00000463372 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-211ENST00000463372 DNAJB1P25685 340 aa16.02■□□□□ 0.16
C9orf3-211ENST00000463372 G3BP1Q13283 466 aaKnown RBP eCLIP16.02■□□□□ 0.16
C9orf3-211ENST00000463372 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
C9orf3-211ENST00000463372 RIN2Q8WYP3 895 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-211ENST00000463372 COPS5Q92905 334 aa16.02■□□□□ 0.16
C9orf3-211ENST00000463372 DBNDD2Q9BQY9 259 aa16.02■□□□□ 0.16
C9orf3-211ENST00000463372 HDAC6Q9UBN7 1215 aa16.02■□□□□ 0.16
C9orf3-211ENST00000463372 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-211ENST00000463372 FRYQ5TBA9 3013 aa16.02■□□□□ 0.15
C9orf3-211ENST00000463372 ASH1LQ9NR48 2969 aaKnown RBP16.02■□□□□ 0.15
C9orf3-211ENST00000463372 CNOT1A5YKK6 2376 aaKnown RBP16.01■□□□□ 0.15
C9orf3-211ENST00000463372 ZZEF1O43149 2961 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 THPOP40225 353 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 BTG3Q14201 252 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-211ENST00000463372 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 PPM1JQ5JR12 505 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 NSMFQ6X4W1 530 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 WNT8BQ93098 351 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 PURBQ96QR8 312 aaKnown RBP16.01■□□□□ 0.15
C9orf3-211ENST00000463372 ANGPTL2Q9UKU9 493 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 CEP295Q9C0D2 2601 aa16.01■□□□□ 0.15
C9orf3-211ENST00000463372 PLXNA4Q9HCM2 1894 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms