RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ZNF467Q7Z7K2 595 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-202ENST00000463060 JMYQ8N9B5 988 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 CYP2W1Q8TAV3 490 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 MTMR9Q96QG7 549 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 TMEM60Q9H2L4 133 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
COL6A1-202ENST00000463060 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 ELP1O95163 1332 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 GPR25O00155 361 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 SLC37A4O43826 429 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 BMP15O95972 392 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 ITGB5P18084 799 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 MCM7P33993 719 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
COL6A1-202ENST00000463060 CEP55Q53EZ4 464 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
COL6A1-202ENST00000463060 TRIM47Q96LD4 638 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 GBP4Q96PP9 640 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 MXRA8Q9BRK3 442 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 GDPD2Q9HCC8 539 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 MGAMO43451 1857 aa16.3■□□□□ 0.2
COL6A1-202ENST00000463060 SPTLC2O15270 562 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 PPP6R2O75170 966 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 RGS20O76081 388 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 NCLP19338 710 aaKnown RBP16.29■□□□□ 0.2
COL6A1-202ENST00000463060 MCM4P33991 863 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 COL13A1Q5TAT6 717 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-202ENST00000463060 MAMDC4Q6UXC1 1216 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 HAS1Q92839 578 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 SPATA32Q96LK8 384 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 INPP4AQ96PE3 977 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-202ENST00000463060 ARHGAP39Q9C0H5 1083 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 JADE2Q9NQC1 790 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
COL6A1-202ENST00000463060 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
COL6A1-202ENST00000463060 PLXNA1Q9UIW2 1896 aa16.29■□□□□ 0.2
COL6A1-202ENST00000463060 LAD1O00515 517 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 FIBPO43427 364 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 NEMFO60524 1076 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 STAM2O75886 525 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 CCND2P30279 289 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 PRPHP41219 470 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 PSMC4P43686 418 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 IL17AQ16552 155 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
COL6A1-202ENST00000463060 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
COL6A1-202ENST00000463060 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 NPLOC4Q8TAT6 608 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 ETNPPLQ8TBG4 499 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 KCNG4Q8TDN1 519 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 MAML3Q96JK9 1138 aa16.28■□□□□ 0.2
COL6A1-202ENST00000463060 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
COL6A1-202ENST00000463060 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
COL6A1-202ENST00000463060 ZSWIM8A7E2V4 1837 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 TNPO2O14787 897 aaKnown RBP16.27■□□□□ 0.2
COL6A1-202ENST00000463060 TBX3O15119 743 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 MSH4O15457 936 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.2
COL6A1-202ENST00000463060 MYCLP12524 364 aaPredicted RBP16.27■□□□□ 0.2
COL6A1-202ENST00000463060 FCGRTP55899 365 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 SEMA3FQ13275 785 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 STK38Q15208 465 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 STXBP2Q15833 593 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 PRR16Q569H4 304 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 NUDT12Q9BQG2 462 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 PCDHA7Q9UN72 937 aa16.27■□□□□ 0.2
COL6A1-202ENST00000463060 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
COL6A1-202ENST00000463060 LRRC37A2A6NM11 1700 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 ASB14A6NK59 587 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 B4DLN1 442 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 MAFGO15525 162 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 ARP10275 920 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 MARCKSP29966 332 aaPredicted RBP16.26■□□□□ 0.19
COL6A1-202ENST00000463060 ICAM3P32942 547 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 ZNF76P36508 570 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
COL6A1-202ENST00000463060 SOCS4Q8WXH5 440 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 GPRASP2Q96D09 838 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 FAM20AQ96MK3 541 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 KATNBL1Q9H079 304 aa16.26■□□□□ 0.19
COL6A1-202ENST00000463060 SPATA31C2B4DYI2 1134 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 DHX15O43143 795 aaKnown RBP16.25■□□□□ 0.19
COL6A1-202ENST00000463060 PRPF40AO75400 957 aaKnown RBP16.25■□□□□ 0.19
COL6A1-202ENST00000463060 SNAI1O95863 264 aaPredicted RBP16.25■□□□□ 0.19
COL6A1-202ENST00000463060 OR52Z1P0C646 297 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 XRCC5P13010 732 aaKnown RBP16.25■□□□□ 0.19
COL6A1-202ENST00000463060 GRIN1Q05586 938 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 CALCRLQ16602 461 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 FERMT2Q96AC1 680 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms