RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ZNF713Q8N859 430 aaPredicted RBP21.68■■□□□ 1.06
COL9A3-203ENST00000462700 A0A0U1RQG5 324 aaPredicted RBP21.67■■□□□ 1.06
COL9A3-203ENST00000462700 STXBP3O00186 592 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 NAPAP54920 295 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 UBE2SQ16763 222 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 TYW1BQ6NUM6 668 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 VTI1AQ96AJ9 217 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 IL17RAQ96F46 866 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 PRO3102Q9H379 93 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 BARHL2Q9NY43 387 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 PCDH10Q9P2E7 1040 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 DDX41Q9UJV9 622 aaKnown RBP21.67■■□□□ 1.06
COL9A3-203ENST00000462700 MRVI1Q9Y6F6 885 aa21.67■■□□□ 1.06
COL9A3-203ENST00000462700 PQBP1O60828 265 aaKnown RBP21.66■■□□□ 1.06
COL9A3-203ENST00000462700 GH1P01241 217 aa21.66■■□□□ 1.06
COL9A3-203ENST00000462700 CCT2P78371 535 aaKnown RBP21.66■■□□□ 1.06
COL9A3-203ENST00000462700 NTRK3Q16288 839 aa21.66■■□□□ 1.06
COL9A3-203ENST00000462700 PFKFB3Q16875 520 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-203ENST00000462700 ANKRD33Q7Z3H0 272 aa21.66■■□□□ 1.06
COL9A3-203ENST00000462700 ZNF274Q96GC6 653 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-203ENST00000462700 ZFP91Q96JP5 570 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-203ENST00000462700 GDF15Q99988 308 aa21.66■■□□□ 1.06
COL9A3-203ENST00000462700 NCOA5Q9HCD5 579 aaKnown RBP21.66■■□□□ 1.06
COL9A3-203ENST00000462700 PDLIM7Q9NR12 457 aa21.66■■□□□ 1.06
COL9A3-203ENST00000462700 PRKAG2Q9UGJ0 569 aa21.66■■□□□ 1.06
COL9A3-203ENST00000462700 A6NJR5 290 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 ARVCFO00192 962 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 STAM2O75886 525 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 MAGEA10P43363 369 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-203ENST00000462700 CDK7P50613 346 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 MRPS9P82933 396 aaKnown RBP21.65■■□□□ 1.06
COL9A3-203ENST00000462700 ARHGAP1Q07960 439 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 C8orf34Q49A92 452 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 BRDTQ58F21 947 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-203ENST00000462700 TOX2Q96NM4 488 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 LARP6Q9BRS8 491 aaKnown RBP21.65■■□□□ 1.06
COL9A3-203ENST00000462700 PRDM5Q9NQX1 630 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-203ENST00000462700 POLR3EQ9NVU0 708 aa21.65■■□□□ 1.06
COL9A3-203ENST00000462700 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
COL9A3-203ENST00000462700 MROH7Q68CQ1 1323 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 PRPF3O43395 683 aaKnown RBP21.64■■□□□ 1.05
COL9A3-203ENST00000462700 CLTBP09497 229 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 SCG2P13521 617 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 IFNAR1P17181 557 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 PURAQ00577 322 aaKnown RBP21.64■■□□□ 1.05
COL9A3-203ENST00000462700 PCNX4Q63HM2 1172 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 KCNV1Q6PIU1 500 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 SLC43A3Q8NBI5 491 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 PHKBQ93100 1093 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 INPP4AQ96PE3 977 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-203ENST00000462700 RIC8AQ9NPQ8 531 aa21.64■■□□□ 1.05
COL9A3-203ENST00000462700 SPDYE3A6NKU9 549 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 DCDC2CA8MYV0 355 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 MYL3P08590 195 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 ADCY7P51828 1080 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 ITGA7Q13683 1181 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 PKN1Q16512 942 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 HABP4Q5JVS0 413 aaKnown RBP21.63■■□□□ 1.05
COL9A3-203ENST00000462700 XRRA1Q6P2D8 792 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 SH3RF1Q7Z6J0 888 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 TEX2Q8IWB9 1127 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 AFG1LQ8WV93 481 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 EMID1Q96A84 441 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-203ENST00000462700 RNF26Q9BY78 433 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-203ENST00000462700 ALDH8A1Q9H2A2 487 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-203ENST00000462700 PCDHA6Q9UN73 950 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 PCDHA8Q9Y5H6 950 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 KIAA1217Q5T5P2 1943 aa21.63■■□□□ 1.05
COL9A3-203ENST00000462700 GRIN2DO15399 1336 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 TRIM43BA6NCK2 446 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 SMCO2A6NFE2 343 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 KPNA6O60684 536 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 PPFIA3O75145 1194 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 TGFB3P10600 412 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 PSMC6P62333 389 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 AKAP17AQ02040 695 aaKnown RBP21.62■■□□□ 1.05
COL9A3-203ENST00000462700 FAAP100Q0VG06 881 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 GNPTABQ3T906 1256 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 TRIM43Q96BQ3 446 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-203ENST00000462700 MTG1Q9BT17 334 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-203ENST00000462700 SLC26A6Q9BXS9 759 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 RTEL1Q9NZ71 1219 aa21.62■■□□□ 1.05
COL9A3-203ENST00000462700 MMP3P08254 477 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 UBA1P22314 1058 aaKnown RBP21.61■■□□□ 1.05
COL9A3-203ENST00000462700 ICAM3P32942 547 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 BMP8BP34820 402 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 MDM2Q00987 491 aaPredicted RBP21.61■■□□□ 1.05
COL9A3-203ENST00000462700 SP2Q02086 613 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 STK3Q13188 491 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 LAMC2Q13753 1193 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 FAM126BQ8IXS8 530 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 DHX37Q8IY37 1157 aaKnown RBP21.61■■□□□ 1.05
COL9A3-203ENST00000462700 SEZ6LQ9BYH1 1024 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 GLT8D2Q9H1C3 349 aa21.61■■□□□ 1.05
COL9A3-203ENST00000462700 ESYT2A0FGR8 921 aa21.6■■□□□ 1.05
COL9A3-203ENST00000462700 KIAA0355O15063 1070 aa21.6■■□□□ 1.05
COL9A3-203ENST00000462700 FIBPO43427 364 aa21.6■■□□□ 1.05
COL9A3-203ENST00000462700 GGPS1O95749 300 aa21.6■■□□□ 1.05
COL9A3-203ENST00000462700 CELF3Q5SZQ8 465 aaKnown RBP21.6■■□□□ 1.05
COL9A3-203ENST00000462700 LBHD1Q9BQE6 289 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms