RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 TMEM60Q9H2L4 133 aa13.41□□□□□ -0.26
TNRC6A-204ENST00000462400 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
TNRC6A-204ENST00000462400 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
TNRC6A-204ENST00000462400 AKR1B15C9JRZ8 316 aaPredicted RBP13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 MKL1Q969V6 931 aa13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 LRRIQ3A6PVS8 624 aaPredicted RBP13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 ZNF18P17022 549 aa13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 LETM2Q2VYF4 491 aa13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 MTMR14Q8NCE2 650 aa13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 DEF6Q9H4E7 631 aa13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 C6orf50Q9HD87 102 aa13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 SAMSN1Q9NSI8 373 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 HERC5Q9UII4 1024 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 ZBTB21Q9ULJ3 1066 aa13.4□□□□□ -0.26
TNRC6A-204ENST00000462400 CTAGE9A4FU28 777 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 FZD9O00144 591 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 CASP1P29466 404 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 ATP2C1P98194 919 aaPredicted RBP13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 DGKZQ13574 1117 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 GBP3Q9H0R5 595 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 PGAP2Q9UHJ9 254 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 CTAGE15A4D2H0 777 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 CTAGE8P0CG41 777 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 CTAGE6Q86UF2 777 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 CTAGE4Q8IX94 777 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 SLC35F6Q8N357 371 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 DAGLBQ8NCG7 672 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 STAMQ92783 540 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 HACL1Q9UJ83 578 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 SMCHD1A6NHR9 2005 aa13.39□□□□□ -0.27
TNRC6A-204ENST00000462400 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 TEX33O43247 280 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 RNF40O75150 1001 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 ZNF280AP59817 542 aaPredicted RBP13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 CDC37Q16543 378 aaPredicted RBP13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 USH1GQ495M9 461 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 PANX2Q96RD6 677 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 ARFGEF1Q9Y6D6 1849 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 FAM237AA0A1B0GTK4 181 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 ZBTB5O15062 677 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 CCNT1O60563 726 aaKnown RBP13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 ADCY7P51828 1080 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 RBL2Q08999 1139 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 NR1I3Q14994 352 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 E2F4Q16254 413 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 NOA1Q8NC60 698 aaKnown RBP13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 MYCBPQ99417 103 aaPredicted RBP13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 NCAPGQ9BPX3 1015 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 MED4Q9NPJ6 270 aa13.38□□□□□ -0.27
TNRC6A-204ENST00000462400 GNA11P29992 359 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 FAM83AQ86UY5 434 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 EFCAB13Q8IY85 973 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 GPATCH11Q8N954 259 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 TEPSINQ96N21 525 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 LTBP3Q9NS15 1303 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 BMP3P12645 472 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 AFMP43652 599 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 TRAPPC10P48553 1259 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 TNNI2P48788 182 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 TUBB4BP68371 445 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 MDM2Q00987 491 aaPredicted RBP13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 POSTNQ15063 836 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 NONOQ15233 471 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 USP17L6PQ6QN14 398 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 DLK2Q6UY11 383 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 MICALL1Q8N3F8 863 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 IGSF22Q8N9C0 903 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 AFAP1L1Q8TED9 768 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 PLIN2Q99541 437 aa13.37□□□□□ -0.27
TNRC6A-204ENST00000462400 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms