RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
APP-211ENST00000462267 CALML3P27482 149 aa18.04■□□□□ 0.48
APP-211ENST00000462267 PTK7Q13308 1070 aa18.04■□□□□ 0.48
APP-211ENST00000462267 SLC30A10Q6XR72 485 aa18.04■□□□□ 0.48
APP-211ENST00000462267 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.04■□□□□ 0.48
APP-211ENST00000462267 RNF207Q6ZRF8 634 aa18.04■□□□□ 0.48
APP-211ENST00000462267 RNF135Q8IUD6 432 aa18.04■□□□□ 0.48
APP-211ENST00000462267 MYOCDQ8IZQ8 938 aa18.04■□□□□ 0.48
APP-211ENST00000462267 AFG1LQ8WV93 481 aa18.04■□□□□ 0.48
APP-211ENST00000462267 KAT2BQ92831 832 aa18.04■□□□□ 0.48
APP-211ENST00000462267 PNMA2Q9UL42 364 aa18.04■□□□□ 0.48
APP-211ENST00000462267 STX8Q9UNK0 236 aa18.04■□□□□ 0.48
APP-211ENST00000462267 EMSYQ7Z589 1322 aa18.03■□□□□ 0.48
APP-211ENST00000462267 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
APP-211ENST00000462267 MMP3P08254 477 aa18.03■□□□□ 0.48
APP-211ENST00000462267 LTBRP36941 435 aa18.03■□□□□ 0.48
APP-211ENST00000462267 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
APP-211ENST00000462267 IER5LQ5T953 404 aa18.03■□□□□ 0.48
APP-211ENST00000462267 TRAF7Q6Q0C0 670 aa18.03■□□□□ 0.48
APP-211ENST00000462267 BTNL9Q6UXG8 535 aa18.03■□□□□ 0.48
APP-211ENST00000462267 IFNL3Q8IZI9 196 aa18.03■□□□□ 0.48
APP-211ENST00000462267 C7orf31Q8N865 590 aa18.03■□□□□ 0.48
APP-211ENST00000462267 CLEC4DQ8WXI8 215 aa18.03■□□□□ 0.48
APP-211ENST00000462267 NACAP1Q9BZK3 213 aa18.03■□□□□ 0.48
APP-211ENST00000462267 GFRA3O60609 400 aa18.02■□□□□ 0.48
APP-211ENST00000462267 ARIH2O95376 493 aa18.02■□□□□ 0.48
APP-211ENST00000462267 GH1P01241 217 aa18.02■□□□□ 0.48
APP-211ENST00000462267 RPS6P62753 249 aaKnown RBP18.02■□□□□ 0.48
APP-211ENST00000462267 MBTPS1Q14703 1052 aa18.02■□□□□ 0.48
APP-211ENST00000462267 CTC1Q2NKJ3 1217 aa18.02■□□□□ 0.48
APP-211ENST00000462267 TRIM71Q2Q1W2 868 aaKnown RBP18.02■□□□□ 0.48
APP-211ENST00000462267 ZNF618Q5T7W0 954 aa18.02■□□□□ 0.48
APP-211ENST00000462267 CCDC62Q6P9F0 684 aa18.02■□□□□ 0.48
APP-211ENST00000462267 RPAINQ86UA6 219 aa18.02■□□□□ 0.48
APP-211ENST00000462267 FBXO11Q86XK2 927 aa18.02■□□□□ 0.48
APP-211ENST00000462267 TMEM192Q8IY95 271 aa18.02■□□□□ 0.48
APP-211ENST00000462267 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
APP-211ENST00000462267 DCAF4Q8WV16 495 aa18.02■□□□□ 0.48
APP-211ENST00000462267 PBXIP1Q96AQ6 731 aa18.02■□□□□ 0.48
APP-211ENST00000462267 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
APP-211ENST00000462267 ZFHX2Q9C0A1 2572 aaPredicted RBP18.02■□□□□ 0.47
APP-211ENST00000462267 RNF113AO15541 343 aaKnown RBP18.01■□□□□ 0.47
APP-211ENST00000462267 MBTPS2O43462 519 aa18.01■□□□□ 0.47
APP-211ENST00000462267 ZFYP08048 801 aaPredicted RBP18.01■□□□□ 0.47
APP-211ENST00000462267 TCF15Q12870 199 aa18.01■□□□□ 0.47
APP-211ENST00000462267 CCDC96Q2M329 555 aa18.01■□□□□ 0.47
APP-211ENST00000462267 SYDE2Q5VT97 1194 aa18.01■□□□□ 0.47
APP-211ENST00000462267 TRIM67Q6ZTA4 783 aa18.01■□□□□ 0.47
APP-211ENST00000462267 SUGP1Q8IWZ8 645 aaKnown RBP18.01■□□□□ 0.47
APP-211ENST00000462267 DBF4BQ8NFT6 615 aa18.01■□□□□ 0.47
APP-211ENST00000462267 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
APP-211ENST00000462267 KATNAL1Q9BW62 490 aa18.01■□□□□ 0.47
APP-211ENST00000462267 CACNA1HO95180 2353 aa18.01■□□□□ 0.47
APP-211ENST00000462267 CACNA1AO00555 2505 aa18■□□□□ 0.47
APP-211ENST00000462267 TMEM221A6NGB7 291 aa18■□□□□ 0.47
APP-211ENST00000462267 M0R296 226 aa18■□□□□ 0.47
APP-211ENST00000462267 SLC16A2P36021 539 aa18■□□□□ 0.47
APP-211ENST00000462267 ARHGAP1Q07960 439 aa18■□□□□ 0.47
APP-211ENST00000462267 SMAD4Q13485 552 aaKnown RBP18■□□□□ 0.47
APP-211ENST00000462267 DGKDQ16760 1214 aa18■□□□□ 0.47
APP-211ENST00000462267 RASGRP2Q7LDG7 609 aa18■□□□□ 0.47
APP-211ENST00000462267 IRF2BPLQ9H1B7 796 aa18■□□□□ 0.47
APP-211ENST00000462267 IL17RBQ9NRM6 502 aa18■□□□□ 0.47
APP-211ENST00000462267 MICAL3Q7RTP6 2002 aa17.99■□□□□ 0.47
APP-211ENST00000462267 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
APP-211ENST00000462267 TSPY2A6NKD2 308 aa17.99■□□□□ 0.47
APP-211ENST00000462267 PSEN2P49810 448 aa17.99■□□□□ 0.47
APP-211ENST00000462267 PPARAQ07869 468 aa17.99■□□□□ 0.47
APP-211ENST00000462267 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
APP-211ENST00000462267 SIRT2Q8IXJ6 389 aa17.99■□□□□ 0.47
APP-211ENST00000462267 TOP1MTQ969P6 601 aa17.99■□□□□ 0.47
APP-211ENST00000462267 MTMR7Q9Y216 660 aa17.99■□□□□ 0.47
APP-211ENST00000462267 PTPRZ1P23471 2315 aaPredicted RBP17.98■□□□□ 0.47
APP-211ENST00000462267 STXBP3O00186 592 aa17.98■□□□□ 0.47
APP-211ENST00000462267 NOVP48745 357 aa17.98■□□□□ 0.47
APP-211ENST00000462267 LY6KQ17RY6 165 aa17.98■□□□□ 0.47
APP-211ENST00000462267 PLEKHG4Q58EX7 1191 aa17.98■□□□□ 0.47
APP-211ENST00000462267 WNT8BQ93098 351 aa17.98■□□□□ 0.47
APP-211ENST00000462267 ALG1Q9BT22 464 aa17.98■□□□□ 0.47
APP-211ENST00000462267 LMAN2LQ9H0V9 348 aa17.98■□□□□ 0.47
APP-211ENST00000462267 NAPBQ9H115 298 aa17.98■□□□□ 0.47
APP-211ENST00000462267 COL4A6Q14031 1691 aa17.98■□□□□ 0.47
APP-211ENST00000462267 C5orf42Q9H799 3197 aa17.97■□□□□ 0.47
APP-211ENST00000462267 SPTBN4Q9H254 2564 aa17.97■□□□□ 0.47
APP-211ENST00000462267 RSPH10B2B2RC85 870 aa17.97■□□□□ 0.47
APP-211ENST00000462267 M0R2C6 588 aa17.97■□□□□ 0.47
APP-211ENST00000462267 HAS3O00219 553 aa17.97■□□□□ 0.47
APP-211ENST00000462267 NMT2O60551 498 aa17.97■□□□□ 0.47
APP-211ENST00000462267 F2P00734 622 aa17.97■□□□□ 0.47
APP-211ENST00000462267 RB1P06400 928 aa17.97■□□□□ 0.47
APP-211ENST00000462267 RSPH10BP0C881 870 aa17.97■□□□□ 0.47
APP-211ENST00000462267 DLX2Q07687 328 aaPredicted RBP17.97■□□□□ 0.47
APP-211ENST00000462267 MFSD10Q14728 455 aa17.97■□□□□ 0.47
APP-211ENST00000462267 CLUL1Q15846 466 aa17.97■□□□□ 0.47
APP-211ENST00000462267 KIAA0753Q2KHM9 967 aa17.97■□□□□ 0.47
APP-211ENST00000462267 SEPT14Q6ZU15 432 aa17.97■□□□□ 0.47
APP-211ENST00000462267 CHST3Q7LGC8 479 aa17.97■□□□□ 0.47
APP-211ENST00000462267 FBXL6Q8N531 539 aa17.97■□□□□ 0.47
APP-211ENST00000462267 RGS22Q8NE09 1264 aa17.97■□□□□ 0.47
APP-211ENST00000462267 PANK1Q8TE04 598 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms