RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SHISA5Q8N114 240 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 DTWD2Q8NBA8 298 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 ZNF526Q8TF50 670 aaPredicted RBP6.73□□□□□ -1.33
COPS3-204ENST00000462236 HAUS7Q99871 368 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 GPR62Q9BZJ7 368 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 GBP3Q9H0R5 595 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 ZSWIM4Q9H7M6 989 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 PCDHB12Q9Y5F1 795 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 EVC2Q86UK5 1308 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 IGSF1Q8N6C5 1336 aa6.73□□□□□ -1.33
COPS3-204ENST00000462236 KTN1Q86UP2 1357 aaKnown RBP6.72□□□□□ -1.33
COPS3-204ENST00000462236 VIRMAQ69YN4 1812 aaKnown RBP6.72□□□□□ -1.33
COPS3-204ENST00000462236 FAM86C2PA6NEL3 165 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 C9IYK1 514 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 PDPK1O15530 556 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 CYP26A1O43174 497 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 GRIK1P39086 918 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 RASA3Q14644 834 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 PRSS36Q5K4E3 855 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 AXDND1Q5T1B0 1012 aaPredicted RBP6.72□□□□□ -1.33
COPS3-204ENST00000462236 HEATR6Q6AI08 1181 aaKnown RBP6.72□□□□□ -1.33
COPS3-204ENST00000462236 MICAL1Q8TDZ2 1067 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 MRFAP1L1Q96HT8 127 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 Q96M66 194 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 DEPDC7Q96QD5 511 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 ASCC2Q9H1I8 757 aaPredicted RBP6.72□□□□□ -1.33
COPS3-204ENST00000462236 WHRNQ9P202 907 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 CCNL1Q9UK58 526 aaPredicted RBP6.72□□□□□ -1.33
COPS3-204ENST00000462236 PXDNLA1KZ92 1463 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 DLEC1Q9Y238 1755 aa6.72□□□□□ -1.33
COPS3-204ENST00000462236 TMEM265A0A087WTH1 108 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 IQCA1LA6NCM1 817 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 FAM155AB1AL88 458 aaPredicted RBP6.71□□□□□ -1.34
COPS3-204ENST00000462236 CBX7O95931 251 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 CEACAM5P06731 702 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 CD247P20963 164 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 IFI16Q16666 785 aaKnown RBP6.71□□□□□ -1.34
COPS3-204ENST00000462236 FLAD1Q8NFF5 587 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 NETO1Q8TDF5 533 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 IP6K1Q92551 441 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 RCC1LQ96I51 464 aaKnown RBP6.71□□□□□ -1.34
COPS3-204ENST00000462236 SRPK1Q96SB4 655 aaKnown RBP6.71□□□□□ -1.34
COPS3-204ENST00000462236 APBA2Q99767 749 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 KLHL25Q9H0H3 589 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 TRIT1Q9H3H1 467 aaKnown RBP6.71□□□□□ -1.34
COPS3-204ENST00000462236 ST7Q9NRC1 585 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 SNTG2Q9NY99 539 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 PCDHB10Q9UN67 800 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 FHOD1Q9Y613 1164 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 CNTNAP4Q9C0A0 1308 aa6.71□□□□□ -1.34
COPS3-204ENST00000462236 AFDNP55196 1824 aaKnown RBP6.71□□□□□ -1.34
COPS3-204ENST00000462236 EDC4Q6P2E9 1401 aaKnown RBP6.7□□□□□ -1.34
COPS3-204ENST00000462236 CBFA2T2O43439 604 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 SUSD5O60279 629 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 PPM1BO75688 479 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 TP53P04637 393 aaPredicted RBP6.7□□□□□ -1.34
COPS3-204ENST00000462236 FURINP09958 794 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 SRFP11831 508 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 ITGA4P13612 1032 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 TNK2Q07912 1038 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 SYTL5Q8TDW5 730 aaPredicted RBP6.7□□□□□ -1.34
COPS3-204ENST00000462236 MISP3Q96FF7 219 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 SGSM3Q96HU1 749 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 ZNF512BQ96KM6 892 aaPredicted RBP6.7□□□□□ -1.34
COPS3-204ENST00000462236 SEMA6BQ9H3T3 888 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 GP6Q9HCN6 339 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 GPATCH2Q9NW75 528 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 SUSD2Q9UGT4 822 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 RNF112Q9ULX5 631 aa6.7□□□□□ -1.34
COPS3-204ENST00000462236 USP47Q96K76 1375 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 ADAMTS7Q9UKP4 1686 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 PRR33A8MZF0 331 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 AGRPO00253 132 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 SHOXO15266 292 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 SIGLEC6O43699 453 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 EPHX1P07099 455 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 FSTL1Q12841 308 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 IFRD2Q12894 506 aaPredicted RBP6.69□□□□□ -1.34
COPS3-204ENST00000462236 NMIQ13287 307 aaPredicted RBP6.69□□□□□ -1.34
COPS3-204ENST00000462236 NKPD1Q17RQ9 610 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 TDRD10Q5VZ19 366 aaKnown RBP6.69□□□□□ -1.34
COPS3-204ENST00000462236 MRM1Q6IN84 353 aaKnown RBP6.69□□□□□ -1.34
COPS3-204ENST00000462236 NME9Q86XW9 330 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 CRACR2BQ8N4Y2 399 aaPredicted RBP6.69□□□□□ -1.34
COPS3-204ENST00000462236 DAGLBQ8NCG7 672 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 ZCRB1Q8TBF4 217 aaKnown RBP6.69□□□□□ -1.34
COPS3-204ENST00000462236 PRDM14Q9GZV8 571 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 LRRC4CQ9HCJ2 640 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 NMRK2Q9NPI5 230 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 FBXL21Q9UKT6 434 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
COPS3-204ENST00000462236 ST14Q9Y5Y6 855 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 ANKRD26Q9UPS8 1709 aa6.69□□□□□ -1.34
COPS3-204ENST00000462236 NSD3Q9BZ95 1437 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 TIAM2Q8IVF5 1701 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 B2RBV5 119 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 COBLO75128 1261 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 LRRN2O75325 713 aa6.68□□□□□ -1.34
COPS3-204ENST00000462236 HMGB2P26583 209 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms