RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 ARFGAP3Q9NP61 516 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-204ENST00000461897 RAB21Q9UL25 225 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 YBX3P16989 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL4A6-204ENST00000461897 CLK2P49760 499 aaKnown RBP13.93□□□□□ -0.18
COL4A6-204ENST00000461897 SNAP25P60880 206 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
COL4A6-204ENST00000461897 ANGEL2Q5VTE6 544 aaKnown RBP13.93□□□□□ -0.18
COL4A6-204ENST00000461897 MSANTD4Q8NCY6 345 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 TBCKQ8TEA7 893 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 TMEM60Q9H2L4 133 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 VCPKMTQ9H867 229 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 MAP2K7O14733 419 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 SEC31AO94979 1220 aaKnown RBP13.92□□□□□ -0.18
COL4A6-204ENST00000461897 CASP14P31944 242 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 EPS15P42566 896 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 KRT31Q15323 416 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 UBE2SQ16763 222 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 TEX35Q5T0J7 233 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 NBPF12Q5TAG4 269 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-204ENST00000461897 NEK8Q86SG6 692 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 CUL5Q93034 780 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 RMND1Q9NWS8 449 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 PCDHA1Q9Y5I3 950 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 DOCK1Q14185 1865 aa13.92□□□□□ -0.18
COL4A6-204ENST00000461897 EDIL3O43854 480 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 LONP1P36776 959 aaKnown RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 FXR1P51114 621 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 STAT2P52630 851 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 HIRAP54198 1017 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 STX17P56962 302 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 CHMP4BP1P59074 171 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 LETM2Q2VYF4 491 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 FAM83BQ5T0W9 1011 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 KLHL10Q6JEL2 608 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 MTRQ99707 1265 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 PRR12Q9ULL5 1215 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 MYH7BA7E2Y1 1941 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 CASP1P29466 404 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 COPB1P53618 953 aaKnown RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 PAK1Q13153 545 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 APOBEC3FQ8IUX4 373 aaKnown RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 IRX2Q9BZI1 471 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-204ENST00000461897 SH2D4AQ9H788 454 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 PSTPIP2Q9H939 334 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 ABHD10Q9NUJ1 306 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 GGA3Q9NZ52 723 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 CALCOCO1Q9P1Z2 691 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 CTNND2Q9UQB3 1225 aa13.91□□□□□ -0.18
COL4A6-204ENST00000461897 SMCHD1A6NHR9 2005 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 LAD1O00515 517 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 CCNT1O60563 726 aaKnown RBP13.9□□□□□ -0.18
COL4A6-204ENST00000461897 TUBBP07437 444 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 TAL1P17542 331 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-204ENST00000461897 SMC1AQ14683 1233 aaKnown RBP13.9□□□□□ -0.18
COL4A6-204ENST00000461897 WHAMMP3Q1A5X7 153 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 SMYD4Q8IYR2 804 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-204ENST00000461897 AMNQ9BXJ7 453 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 EPC1Q9H2F5 836 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 ANKZF1Q9H8Y5 726 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 RNF181Q9P0P0 153 aa13.9□□□□□ -0.18
COL4A6-204ENST00000461897 SSC5DA1L4H1 1573 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 CTAGE9A4FU28 777 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 CTNND1O60716 968 aaKnown RBP13.89□□□□□ -0.19
COL4A6-204ENST00000461897 DDNO94850 711 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-204ENST00000461897 MYL1P05976 194 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 PRPHP41219 470 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 ARHGAP25P42331 645 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
COL4A6-204ENST00000461897 ERVK-24P63145 666 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 TCP11X2Q5H9J9 407 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 PRAMEF18Q5VWM3 479 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 FBXO11Q86XK2 927 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 ANKRD20A12PQ8NF67 263 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 LZTFL1Q9NQ48 299 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 PSD3Q9NYI0 1048 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 A0A1W2PQC6 194 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L15C9J2P7 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L13C9JLJ4 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L11C9JVI0 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L18D6R9N7 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L22D6RA61 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L17D6RBQ6 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L19D6RCP7 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L20D6RJB6 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 N4BP3O15049 544 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 INPP5BP32019 993 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L24Q0WX57 530 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 ORC2Q13416 577 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-204ENST00000461897 KCNB1Q14721 858 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USH1GQ495M9 461 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms