RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 GPCPD1Q9NPB8 672 aa10.2□□□□□ -0.78
HDAC9-220ENST00000461409 DIAPH3Q9NSV4 1193 aa10.2□□□□□ -0.78
HDAC9-220ENST00000461409 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
HDAC9-220ENST00000461409 WDR19Q8NEZ3 1342 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-220ENST00000461409 PTPDC1A2A3K4 754 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 B4DLN1 442 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 DLL1O00548 723 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 CTAGE5O15320 804 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 SMPD1P17405 629 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 MRPL12P52815 198 aaKnown RBP10.19□□□□□ -0.78
HDAC9-220ENST00000461409 EPHB4P54760 987 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 BEX3Q00994 111 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 FUT2Q10981 343 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 BAATQ14032 418 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-220ENST00000461409 TTBK2Q6IQ55 1244 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 CXCL17Q6UXB2 119 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 IQCA1Q86XH1 822 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 DGKHQ86XP1 1220 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 TBC1D10CQ8IV04 446 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 PLEKHM2Q8IWE5 1019 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 FBXO16Q8IX29 292 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-220ENST00000461409 FAM126BQ8IXS8 530 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 TMEM199Q8N511 208 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 MORC4Q8TE76 937 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 YTHDC1Q96MU7 727 aaKnown RBP10.19□□□□□ -0.78
HDAC9-220ENST00000461409 TMUB1Q9BVT8 246 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 SEMA6BQ9H3T3 888 aa10.19□□□□□ -0.78
HDAC9-220ENST00000461409 V9GY48 417 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-220ENST00000461409 RAD50Q92878 1312 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 MCM3APO60318 1980 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 NFIBO00712 420 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 DYNC1LI2O43237 492 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-220ENST00000461409 SNHG28P0DPA3 235 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 ALDH5A1P51649 535 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-220ENST00000461409 ITGA7Q13683 1181 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 DUSP28Q4G0W2 176 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 BRDTQ58F21 947 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-220ENST00000461409 TAPT1Q6NXT6 567 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 PSRC1Q6PGN9 363 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-220ENST00000461409 CWC27Q6UX04 472 aaKnown RBP10.18□□□□□ -0.78
HDAC9-220ENST00000461409 KIAA1211Q6ZU35 1233 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 EEPD1Q7L9B9 569 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 SCUBE3Q8IX30 993 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 SLC43A3Q8NBI5 491 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 CDX2Q99626 313 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-220ENST00000461409 MAF1Q9H063 256 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 MTIF3Q9H2K0 278 aaKnown RBP10.18□□□□□ -0.78
HDAC9-220ENST00000461409 CTNNA3Q9UI47 895 aa10.18□□□□□ -0.78
HDAC9-220ENST00000461409 NEDD4P46934 1319 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-220ENST00000461409 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-220ENST00000461409 ADH1BP00325 375 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 CD4P01730 458 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 CALML3P27482 149 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 GGCXP38435 758 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 CPT1AP50416 773 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 PDE4DQ08499 809 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 IMMTQ16891 758 aaKnown RBP10.17□□□□□ -0.78
HDAC9-220ENST00000461409 ASPRV1Q53RT3 343 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 RNF207Q6ZRF8 634 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 PNMA1Q8ND90 353 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 DNERQ8NFT8 737 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 CLEC4DQ8WXI8 215 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 DSCC1Q9BVC3 393 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 WDR11Q9BZH6 1224 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 HIPK3Q9H422 1215 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 KAT14Q9H8E8 782 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 CNNM2Q9H8M5 875 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 PDGFCQ9NRA1 345 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 POLR3EQ9NVU0 708 aa10.17□□□□□ -0.78
HDAC9-220ENST00000461409 DDX49Q9Y6V7 483 aaKnown RBP10.17□□□□□ -0.78
HDAC9-220ENST00000461409 LRRC37A2A6NM11 1700 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 RBM47A0AV96 593 aaKnown RBP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 NKRFO15226 690 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 KDM4AO75164 1064 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 IGHDP01880 384 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 FOSL2P15408 326 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 CSF2RAP15509 400 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 CYP2C18P33260 490 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 RPS6P62753 249 aaKnown RBP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 PPP2R5BQ15173 497 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 TMEM240Q5SV17 173 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 SLC30A10Q6XR72 485 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 RGS22Q8NE09 1264 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 MAFAQ8NHW3 353 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 EXOC6Q8TAG9 804 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 SCFD2Q8WU76 684 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 ANKS1AQ92625 1134 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 PURBQ96QR8 312 aaKnown RBP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 ZSCAN10Q96SZ4 725 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 ZKSCAN3Q9BRR0 538 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 UBAC1Q9BSL1 405 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 PPP1R12CQ9BZL4 782 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 KRT23Q9C075 422 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 TTYH1Q9H313 450 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-220ENST00000461409 EYSQ5T1H1 3165 aa10.16□□□□□ -0.78
HDAC9-220ENST00000461409 PRUNE2Q8WUY3 3088 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms