RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TRIM67Q6ZTA4 783 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 TRMT10CQ7L0Y3 403 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 CCNYQ8ND76 341 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 PIP4K2CQ8TBX8 421 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 TCP11Q8WWU5 503 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 CNOT6LQ96LI5 555 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 NEUROG2Q9H2A3 272 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 RRP15Q9Y3B9 282 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 RIMS2Q9UQ26 1411 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 EFCAB14O75071 495 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TAF5LO75529 589 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 BRD1O95696 1058 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 PCP11498 1178 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ATP5JP18859 108 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TAC1P20366 129 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 NAA35Q5VZE5 725 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 NACC1Q96RE7 527 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ZNF212Q9UDV6 495 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 IQANK1A0A1B0GTG1 560 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 IPO5O00410 1097 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 MCF2P10911 925 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 PTPROQ16827 1216 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 DARS2Q6PI48 645 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 PCGF5Q86SE9 256 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 NDUFAF2Q8N183 169 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ZNF594Q96JF6 807 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ZNF215Q9UL58 517 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 CAPN11Q9UMQ6 739 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ITM2BQ9Y287 266 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 AFPP02771 609 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 SOX5P35711 763 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 EIF3BP55884 814 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 KCTD16Q68DU8 428 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TMCO5AQ8N6Q1 288 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 DEPDC1BQ8WUY9 529 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ACCSQ96QU6 501 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 FAM96AQ9H5X1 160 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TRIM45Q9H8W5 580 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 SLC39A2Q9NP94 309 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 MRPL40Q9NQ50 206 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TNNQ9UQP3 1299 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 hCG_1642624A0A1W2PR95 340 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 PFKFB2O60825 505 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 POLE2P56282 527 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ZKSCAN8Q15776 578 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TEDDM1Q5T9Z0 273 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 DHTKD1Q96HY7 919 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 LRRC37BQ96QE4 947 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 SUN2Q9UH99 717 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 FANCAO15360 1455 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 GTPBP10A4D1E9 387 aaKnown RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 VGLL3A8MV65 326 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 H3BRJ5 948 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 YWHAHQ04917 246 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-205ENST00000461221 FLOT2Q14254 428 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TRIM60Q495X7 471 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 ZBTB41Q5SVQ8 909 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 GRAMD4Q6IC98 578 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 TRIM59Q8IWR1 403 aa9.73□□□□□ -0.85
BRCA1-205ENST00000461221 GCP02774 474 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 ARHGEF6Q15052 776 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 FANCBQ8NB91 859 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 SUCLG2Q96I99 432 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 FIS1Q9Y3D6 152 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 KIF24Q5T7B8 1368 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 HNRNPDLO14979 420 aaKnown RBP9.72□□□□□ -0.85
BRCA1-205ENST00000461221 CTNND1O60716 968 aaKnown RBP9.72□□□□□ -0.85
BRCA1-205ENST00000461221 NCF2P19878 526 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-205ENST00000461221 ATICP31939 592 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 ODR4Q5SWX8 454 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 FANCLQ9NW38 375 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 MAPK13O15264 365 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 SPAG7O75391 227 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 E2F5Q15329 346 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 TTC19Q6DKK2 380 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-205ENST00000461221 DNAJC24Q6P3W2 148 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 BZW1Q7L1Q6 419 aaKnown RBP9.72□□□□□ -0.85
BRCA1-205ENST00000461221 FAM149B1Q96BN6 582 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 EPB41L5Q9HCM4 733 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 MED23Q9ULK4 1368 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 FRMPD2Q68DX3 1309 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-205ENST00000461221 PPIP5K2O43314 1243 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 SEC24BO95487 1268 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 KCNA4P22459 653 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 EPHB1P54762 984 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 BASP1P80723 227 aaKnown RBP9.72□□□□□ -0.85
BRCA1-205ENST00000461221 OCRLQ01968 901 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 ALS2CLQ60I27 953 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 ELMSAN1Q6PJG2 1045 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 OR9Q1Q8NGQ5 310 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 GSDMAQ96QA5 445 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 TUBGCP2Q9BSJ2 902 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 TMEM206Q9H813 350 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 LRFN2Q9ULH4 789 aa9.72□□□□□ -0.85
BRCA1-205ENST00000461221 PHLPP2Q6ZVD8 1323 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms