RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 DCXO43602 365 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 CKBP12277 381 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 CALML3P27482 149 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 CHMP4BP1P59074 171 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 PDE4DQ08499 809 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 TSHZ3Q63HK5 1081 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 CCDC62Q6P9F0 684 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 TRAF7Q6Q0C0 670 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 KAT2BQ92831 832 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 SNX27Q96L92 541 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 SEC62Q99442 399 aaKnown RBP13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 C17orf80Q9BSJ5 609 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 KCNH6Q9H252 994 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
PCYT1A-213ENST00000460827 MYH7BA7E2Y1 1941 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 ATG2AQ2TAZ0 1938 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 FOXP2O15409 715 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 PARNO95453 639 aaKnown RBP13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 SLC3A2P08195 630 aaKnown RBP13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 MBTPS1Q14703 1052 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 FAM117BQ6P1L5 589 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 DCAF4Q8WV16 495 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 AFG1LQ8WV93 481 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 ANKS1AQ92625 1134 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 CACNA1AO00555 2505 aa13.73□□□□□ -0.21
PCYT1A-213ENST00000460827 NLRC5Q86WI3 1866 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 TSPY2A6NKD2 308 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 H3BQ06 376 aaPredicted RBP13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 MMP3P08254 477 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 ZP2Q05996 745 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 ARHGAP1Q07960 439 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 IKBKEQ14164 716 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 COL19A1Q14993 1142 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 TRIM71Q2Q1W2 868 aaKnown RBP13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 PUS10Q3MIT2 529 aaKnown RBP13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 FBXO22Q8NEZ5 403 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 DNERQ8NFT8 737 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 WNT8BQ93098 351 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 MRPL38Q96DV4 380 aaKnown RBP13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 NAPBQ9H115 298 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 GTF2IRD1Q9UHL9 959 aa13.72□□□□□ -0.21
PCYT1A-213ENST00000460827 DCHS1Q96JQ0 3298 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 DMDP11532 3685 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 EFCAB14O75071 495 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 HTRA4P83105 476 aaPredicted RBP13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 CTDSPL2Q05D32 466 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 HFE2Q6ZVN8 426 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 INSL6Q9Y581 213 aa13.71□□□□□ -0.21
PCYT1A-213ENST00000460827 FAM186AA6NE01 2351 aa13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 MS4A1P11836 297 aa13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 EPC2Q52LR7 807 aa13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 ZNF618Q5T7W0 954 aa13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 MPHOSPH6Q99547 160 aaKnown RBP13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 PRKAG3Q9UGI9 489 aa13.7□□□□□ -0.22
PCYT1A-213ENST00000460827 FRMPD2Q68DX3 1309 aaPredicted RBP13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 ORC4O43929 436 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 RANBP6O60518 1105 aaKnown RBP13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 GH1P01241 217 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 PTK7Q13308 1070 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 LY6KQ17RY6 165 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 TIGD5Q53EQ6 642 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 ZMYM1Q5SVZ6 1142 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 ADHFE1Q8IWW8 467 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 BANK1Q8NDB2 785 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 CTNNA3Q9UI47 895 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 FRYLO94915 3013 aa13.69□□□□□ -0.22
PCYT1A-213ENST00000460827 RALGAPA2Q2PPJ7 1873 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 HAS3O00219 553 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 LGR5O75473 907 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 FGRP09769 529 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 CASTP20810 708 aaKnown RBP13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 IRS1P35568 1242 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 PTPROQ16827 1216 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 C7orf31Q8N865 590 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 RGS22Q8NE09 1264 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 GPATCH3Q96I76 525 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 ANAPC4Q9UJX5 808 aa13.68□□□□□ -0.22
PCYT1A-213ENST00000460827 PNMA2Q9UL42 364 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms