RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 CBLBQ13191 982 aa12.91□□□□□ -0.34
HMGN2-202ENST00000460563 OTUD7AQ8TE49 926 aaPredicted RBP12.91□□□□□ -0.34
HMGN2-202ENST00000460563 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
HMGN2-202ENST00000460563 CEP95Q96GE4 821 aa12.91□□□□□ -0.34
HMGN2-202ENST00000460563 SEC62Q99442 399 aaKnown RBP12.91□□□□□ -0.34
HMGN2-202ENST00000460563 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
HMGN2-202ENST00000460563 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
HMGN2-202ENST00000460563 NYAP2Q9P242 653 aa12.91□□□□□ -0.34
HMGN2-202ENST00000460563 CLIP2Q9UDT6 1046 aa12.91□□□□□ -0.34
HMGN2-202ENST00000460563 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
HMGN2-202ENST00000460563 CARNS1A5YM72 827 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 STAU1O95793 577 aaKnown RBP12.9□□□□□ -0.34
HMGN2-202ENST00000460563 SNAI1O95863 264 aaPredicted RBP12.9□□□□□ -0.34
HMGN2-202ENST00000460563 AKR1A1P14550 325 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 FAM109BQ6ICB4 259 aaPredicted RBP12.9□□□□□ -0.34
HMGN2-202ENST00000460563 GIMAP6Q6P9H5 292 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 RNF180Q86T96 592 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 SIX5Q8N196 739 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 FGD4Q96M96 766 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
HMGN2-202ENST00000460563 VCANP13611 3396 aa12.9□□□□□ -0.34
HMGN2-202ENST00000460563 GBF1Q92538 1859 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 PRUNE2Q8WUY3 3088 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 APPP05067 770 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 CLTBP09497 229 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 COPB2P35606 906 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 RASGRP2Q7LDG7 609 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 ANKMY2Q8IV38 441 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 PLIN4Q96Q06 1357 aa12.89□□□□□ -0.35
HMGN2-202ENST00000460563 ACLYP53396 1101 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 DPYDQ12882 1025 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 TMEM164Q5U3C3 297 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 PRPF38AQ8NAV1 312 aaKnown RBP12.88□□□□□ -0.35
HMGN2-202ENST00000460563 KDF1Q8NAX2 398 aaPredicted RBP12.88□□□□□ -0.35
HMGN2-202ENST00000460563 TPCN2Q8NHX9 752 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 PI4K2BQ8TCG2 481 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 CDX2Q99626 313 aaPredicted RBP12.88□□□□□ -0.35
HMGN2-202ENST00000460563 TTYH1Q9H313 450 aaPredicted RBP12.88□□□□□ -0.35
HMGN2-202ENST00000460563 SLC38A10Q9HBR0 1119 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 HOMER2Q9NSB8 354 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
HMGN2-202ENST00000460563 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 ZBED4O75132 1171 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 PTGS1P23219 599 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 FAAP100Q0VG06 881 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 KCNA10Q16322 511 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 CCSAPQ6IQ19 270 aaPredicted RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 MAMDC4Q6UXC1 1216 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 Q6ZVU0 165 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.359e-9■■■■□ 21.4
HMGN2-202ENST00000460563 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 KLHDC9Q8NEP7 349 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 MYLIPQ8WY64 445 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
HMGN2-202ENST00000460563 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
HMGN2-202ENST00000460563 PATL2C9JE40 543 aaKnown RBP12.86□□□□□ -0.35
HMGN2-202ENST00000460563 KIAA0355O15063 1070 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 FOXP2O15409 715 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 TTLL1O95922 423 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 C6orf222P0C671 652 aaPredicted RBP12.86□□□□□ -0.35
HMGN2-202ENST00000460563 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 RAG1P15918 1043 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 GNAT2P19087 354 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 SNAP25P60880 206 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 ACVR2BQ13705 512 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 ARMCX2Q7L311 632 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 GMCL1P1Q8NEA9 526 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 MKL1Q969V6 931 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 INCENPQ9NQS7 918 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 FAM184BQ9ULE4 1060 aa12.86□□□□□ -0.35
HMGN2-202ENST00000460563 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.85□□□□□ -0.35
HMGN2-202ENST00000460563 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 NMT2O60551 498 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 DUSP11O75319 330 aaKnown RBP12.85□□□□□ -0.35
HMGN2-202ENST00000460563 ADH1AP07327 375 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms