RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PABPC4Q13310 644 aaKnown RBP eCLIP17.65■□□□□ 0.421e-6■□□□□ 9.5
CMTM3-203ENST00000460097 CHST3Q7LGC8 479 aa17.65■□□□□ 0.42
CMTM3-203ENST00000460097 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-203ENST00000460097 SLC45A1Q9Y2W3 748 aa17.65■□□□□ 0.42
CMTM3-203ENST00000460097 GREB1LQ9C091 1923 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-203ENST00000460097 CTAGE9A4FU28 777 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 CPP00450 1065 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 PTPREP23469 700 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 TAF1CQ15572 869 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-203ENST00000460097 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 PDILTQ8N807 584 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 WASF1Q92558 559 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 LPAR1Q92633 364 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 TMEM87BQ96K49 555 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 FAM107BQ9H098 131 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 VCPKMTQ9H867 229 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 GOPCQ9HD26 462 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 SYNPO2Q9UMS6 1093 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 PTPRFP10586 1907 aa17.64■□□□□ 0.41
CMTM3-203ENST00000460097 RAD21O60216 631 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 NOVP48745 357 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 HSP90B2PQ58FF3 399 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 APTXQ7Z2E3 356 aaKnown RBP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 CNGA4Q8IV77 575 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 FAM177A1Q8N128 213 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 TRERF1Q96PN7 1200 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 ZKSCAN3Q9BRR0 538 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 ZFYVE28Q9HCC9 887 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 GPHNQ9NQX3 736 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 VPS18Q9P253 973 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 LCMT1Q9UIC8 334 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 F5H6K3 240 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 SH2B2O14492 632 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 VCAM1P19320 739 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 OSBPP22059 807 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 CDC27P30260 824 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 HOXA7P31268 230 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 ADKP55263 362 aaKnown RBP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 CORO7P57737 925 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 KLRC3Q07444 240 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 GOLGA8FQ08AF8 430 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 GOLGA8DPQ0D2H9 430 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 TRIM29Q14134 588 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 ICE2Q659A1 982 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 ISM2Q6H9L7 571 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 C10orf67Q8IYJ2 551 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 SPICE1Q8N0Z3 855 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 PPM1EQ8WY54 764 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 ZSCAN10Q96SZ4 725 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-203ENST00000460097 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 PNMA3Q9UL41 463 aa17.63■□□□□ 0.41
CMTM3-203ENST00000460097 CRHR2Q13324 411 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 CASP8Q14790 479 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 KIAA1755Q5JYT7 1200 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 SPATA1Q5VX52 437 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 PPFIBP1Q86W92 1011 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 DGKHQ86XP1 1220 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 TMTC1Q8IUR5 882 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 LRRC47Q8N1G4 583 aaKnown RBP17.62■□□□□ 0.41
CMTM3-203ENST00000460097 UBAC1Q9BSL1 405 aa17.62■□□□□ 0.41
CMTM3-203ENST00000460097 CTAGE15A4D2H0 777 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L15C9J2P7 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L13C9JLJ4 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L11C9JVI0 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L18D6R9N7 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L22D6RA61 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L17D6RBQ6 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L19D6RCP7 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L20D6RJB6 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 TRIM66O15016 1216 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 FOXN1O15353 648 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 MFAP3LO75121 409 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 CTAGE8P0CG41 777 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 USP17L24Q0WX57 530 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 NTRK3Q16288 839 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 CTAGE6Q86UF2 777 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 CTAGE4Q8IX94 777 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 PNKPQ96T60 521 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 PARK7Q99497 189 aaKnown RBP17.61■□□□□ 0.41
CMTM3-203ENST00000460097 NAPGQ99747 312 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-203ENST00000460097 RPAP3Q9H6T3 665 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-203ENST00000460097 ABCB6Q9NP58 842 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 TSKSQ9UJT2 592 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 CYP2C8P10632 490 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-203ENST00000460097 TRIM14Q14142 442 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 RILPL1Q5EBL4 403 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 CDKAL1Q5VV42 579 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 CATSPERGQ6ZRH7 1159 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 GMCL1P1Q8NEA9 526 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 ASCC2Q9H1I8 757 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-203ENST00000460097 R3HDMLQ9H3Y0 253 aa17.61■□□□□ 0.41
CMTM3-203ENST00000460097 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-203ENST00000460097 WDR46O15213 610 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms