RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TMX3Q96JJ7 454 aa18■□□□□ 0.47
SDF4-204ENST00000459994 PPP1R12CQ9BZL4 782 aa18■□□□□ 0.47
SDF4-204ENST00000459994 MTMR10Q9NXD2 777 aa18■□□□□ 0.47
SDF4-204ENST00000459994 Q9Y3F1 56 aa18■□□□□ 0.47
SDF4-204ENST00000459994 TANC1Q9C0D5 1861 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 K7ELQ4 463 aaPredicted RBP17.99■□□□□ 0.47
SDF4-204ENST00000459994 TIMP1P01033 207 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 ITGA7Q13683 1181 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 GPR153Q6NV75 609 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 C16orf59Q7L2K0 433 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 MICU3Q86XE3 530 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 FANCBQ8NB91 859 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 FAM161BQ96MY7 647 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 PIGSQ96S52 555 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 MYL10Q9BUA6 226 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 SLKQ9H2G2 1235 aaPredicted RBP17.99■□□□□ 0.47
SDF4-204ENST00000459994 PNMA2Q9UL42 364 aa17.99■□□□□ 0.47
SDF4-204ENST00000459994 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
SDF4-204ENST00000459994 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 B4GALT4O60513 344 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 LARGE1O95461 756 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 KIF5BP33176 963 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 METAP2P50579 478 aaKnown RBP eCLIP17.98■□□□□ 0.47
SDF4-204ENST00000459994 FPGSQ05932 587 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 BECN1Q14457 450 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
SDF4-204ENST00000459994 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
SDF4-204ENST00000459994 TRPV6Q9H1D0 765 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 MROH7Q68CQ1 1323 aa17.98■□□□□ 0.47
SDF4-204ENST00000459994 CDH23Q9H251 3354 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 GOLGA8AA7E2F4 631 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 ZBTB5O15062 677 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 CFBP00751 764 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 MYL3P08590 195 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
SDF4-204ENST00000459994 CYP2C18P33260 490 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 GNAQP50148 359 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 PURAQ00577 322 aaKnown RBP17.97■□□□□ 0.47
SDF4-204ENST00000459994 RTN1Q16799 776 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 ZFP91Q96JP5 570 aaPredicted RBP17.97■□□□□ 0.47
SDF4-204ENST00000459994 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
SDF4-204ENST00000459994 RIOX1Q9H6W3 641 aa17.97■□□□□ 0.47
SDF4-204ENST00000459994 FAM217BQ9NTX9 383 aaPredicted RBP17.97■□□□□ 0.47
SDF4-204ENST00000459994 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
SDF4-204ENST00000459994 MRPL11Q9Y3B7 192 aaKnown RBP17.97■□□□□ 0.47
SDF4-204ENST00000459994 PTPRSQ13332 1948 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 ACRP10323 421 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 TXNP10599 105 aaKnown RBP17.96■□□□□ 0.47
SDF4-204ENST00000459994 CSF2RAP15509 400 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 RXRAP19793 462 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 HOXA13P31271 388 aaPredicted RBP17.96■□□□□ 0.47
SDF4-204ENST00000459994 HSD17B4P51659 736 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 SCRN1Q12765 414 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 STK3Q13188 491 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 CUL4AQ13619 759 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 LY6KQ17RY6 165 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 FAM109BQ6ICB4 259 aaPredicted RBP17.96■□□□□ 0.47
SDF4-204ENST00000459994 MFSD5Q6N075 450 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 CCDC62Q6P9F0 684 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 SEPT14Q6ZU15 432 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 PIBF1Q8WXW3 757 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 GUCD1Q96NT3 240 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 RMDN3Q96TC7 470 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 LZTS2Q9BRK4 669 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
SDF4-204ENST00000459994 CABYRO75952 493 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
SDF4-204ENST00000459994 NECAB1Q8N987 351 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 SCFD2Q8WU76 684 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 RNPC3Q96LT9 517 aaKnown RBP17.95■□□□□ 0.46
SDF4-204ENST00000459994 PXMP2Q9NR77 195 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 TET1Q8NFU7 2136 aa17.95■□□□□ 0.46
SDF4-204ENST00000459994 TLR3O15455 904 aaKnown RBP17.94■□□□□ 0.46
SDF4-204ENST00000459994 ZEB2O60315 1214 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 RGS20O76081 388 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 CDC27P30260 824 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
SDF4-204ENST00000459994 GHRHRQ02643 423 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 ST3GAL1Q11201 340 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 TMEM240Q5SV17 173 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
SDF4-204ENST00000459994 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 MCF2L2Q86YR7 1114 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 NSUN6Q8TEA1 469 aaKnown RBP17.94■□□□□ 0.46
SDF4-204ENST00000459994 VWCEQ96DN2 955 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 WNT8AQ9H1J5 351 aa17.94■□□□□ 0.46
SDF4-204ENST00000459994 TTYH1Q9H313 450 aaPredicted RBP17.94■□□□□ 0.46
SDF4-204ENST00000459994 NCOA5Q9HCD5 579 aaKnown RBP17.94■□□□□ 0.46
SDF4-204ENST00000459994 TRMT13Q9NUP7 481 aaKnown RBP17.94■□□□□ 0.46
SDF4-204ENST00000459994 EYSQ5T1H1 3165 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 PLEKHA8P1O95397 391 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 NR3C2P08235 984 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms