RNA–Protein interactions for RNA: ENST00000459908.5

ATP11A-208, Transcript of ATPase phospholipid transporting 11A, human

TSL 2

Gene ATP11A, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP11A-208	ENST00000459908	RIC8A	Q9NPQ8	531 aa		11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	PCDHB13	Q9Y5F0	798 aa		11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	LONP1	P36776	959 aa	Known RBP	11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	PPP1R2	P41236	205 aa		11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	DPH6	Q7L8W6	267 aa		11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	SLC51A	Q86UW1	340 aa		11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	DPF3	Q92784	378 aa		11.76	□□□□□ -0.53
ATP11A-208	ENST00000459908	CCDC155	Q8N6L0	562 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	STAM	Q92783	540 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	PPP1R16B	Q96T49	567 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	KATNAL1	Q9BW62	490 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	APOL6	Q9BWW8	343 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	USP25	Q9UHP3	1055 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	COL4A3BP	Q9Y5P4	624 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	STK36	Q9NRP7	1315 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	SSR1	P43307	286 aa	Known RBP	11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	NASP	P49321	788 aa	Predicted RBP	11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	EXOSC10	Q01780	885 aa	Known RBP	11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	FAM160A1	Q05DH4	1040 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	USP28	Q96RU2	1077 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	HMX1	Q9NP08	348 aa	Predicted RBP	11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	LEO1	Q8WVC0	666 aa	Predicted RBP	11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	FAM20A	Q96MK3	541 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	MAP3K14	Q99558	947 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	ZNF302	Q9NR11	478 aa		11.75	□□□□□ -0.53
ATP11A-208	ENST00000459908	N4BP3	O15049	544 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	EXOC3	O60645	756 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	SFN	P31947	248 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	RNASEL	Q05823	741 aa	Known RBP	11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	SPAG1	Q07617	926 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	TRMT44	Q8IYL2	757 aa	Known RBP	11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	TXLNB	Q8N3L3	684 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	SPAG5	Q96R06	1193 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	DISC1	Q9NRI5	854 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908		K7ENM7	598 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	EPB41	P11171	864 aa	Known RBP	11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	AK8	Q96MA6	479 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	NLRP4	Q96MN2	994 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	SLC9A2	Q9UBY0	812 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	MYPN	Q86TC9	1320 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	VWA5A	O00534	786 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	CETN3	O15182	167 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	ADCY3	O60266	1144 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	LARGE1	O95461	756 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	SMARCA1	P28370	1054 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	SWSAP1	Q6NVH7	229 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	JPH1	Q9HDC5	661 aa	Predicted RBP	11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	MTMR6	Q9Y217	621 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	CCDC85C	A6NKD9	419 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	MEIS1	O00470	390 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	ZNF165	P49910	485 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	STX17	P56962	302 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	CYFIP1	Q7L576	1253 aa		11.74	□□□□□ -0.53
ATP11A-208	ENST00000459908	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	1e-6	■■■■■ 119.9
ATP11A-208	ENST00000459908	CALU	O43852	315 aa	Predicted RBP	11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	EGFR	P00533	1210 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	POTEI	P0CG38	1075 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	ANTXR2	P58335	489 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	TDRD12	Q587J7	1177 aa	Known RBP	11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	CATSPER4	Q7RTX7	472 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	FILIP1	Q7Z7B0	1213 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	SYNC	Q9H7C4	482 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	SLURP2	P0DP57	97 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	CPT1A	P50416	773 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	USP11	P51784	963 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	GSE1	Q14687	1217 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	WDR44	Q5JSH3	913 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	DLK2	Q6UY11	383 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	NELFCD	Q8IXH7	590 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	SEPT1	Q8WYJ6	367 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	GABBR1	Q9UBS5	961 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	BTAF1	O14981	1849 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	EIF3J	O75822	258 aa	Known RBP	11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	NEBL	O76041	1014 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	KRT19	P08727	400 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	SRGAP2C	P0DJJ0	459 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	ADORA2A	P29274	412 aa		11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	CTTN	Q14247	550 aa	Known RBP	11.73	□□□□□ -0.53
ATP11A-208	ENST00000459908	XIRP1	Q702N8	1843 aa	Known RBP	11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	STAT5B	P51692	787 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	XRRA1	Q6P2D8	792 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	CATSPERG	Q6ZRH7	1159 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	TCP11	Q8WWU5	503 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	TAAR1	Q96RJ0	339 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	PARP2	Q9UGN5	583 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	MAPK8IP1	Q9UQF2	711 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	PCDHA10	Q9Y5I2	948 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	BTBD19	C9JJ37	291 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	PRELP	P51888	382 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	TROAP	Q12815	778 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	CCAR2	Q8N163	923 aa	Known RBP	11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	PCSK9	Q8NBP7	692 aa	Known RBP	11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	GJB4	Q9NTQ9	266 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	DCDC2C	A8MYV0	355 aa		11.72	□□□□□ -0.53
ATP11A-208	ENST00000459908	RFX1	P22670	979 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms