RNA–Protein interactions for RNA: ENST00000459787.1

GYPC-204, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 3

Gene GYPC, Length 758 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-204ENST00000459787 ITGA7Q13683 1181 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 PGM5Q15124 567 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 XRRA1Q6P2D8 792 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 SMARCC2Q8TAQ2 1214 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 BRF1Q92994 677 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 TRIM43Q96BQ3 446 aaPredicted RBP16.51■□□□□ 0.23
GYPC-204ENST00000459787 MTG1Q9BT17 334 aaPredicted RBP16.51■□□□□ 0.23
GYPC-204ENST00000459787 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 DDX41Q9UJV9 622 aaKnown RBP16.51■□□□□ 0.23
GYPC-204ENST00000459787 MRVI1Q9Y6F6 885 aa16.51■□□□□ 0.23
GYPC-204ENST00000459787 V9GY48 417 aaPredicted RBP16.51■□□□□ 0.23
GYPC-204ENST00000459787 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 MEIS2O14770 477 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
GYPC-204ENST00000459787 CPA1P15085 419 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.232e-8■■□□□ 12
GYPC-204ENST00000459787 FXR1P51114 621 aaKnown RBP eCLIP16.5■□□□□ 0.23
GYPC-204ENST00000459787 EVCP57679 992 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 PURAQ00577 322 aaKnown RBP16.5■□□□□ 0.23
GYPC-204ENST00000459787 LAMC2Q13753 1193 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 LY6KQ17RY6 165 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 RUFY3Q7L099 469 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 TDHQ8IZJ6 230 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
GYPC-204ENST00000459787 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
GYPC-204ENST00000459787 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
GYPC-204ENST00000459787 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
GYPC-204ENST00000459787 CYP46A1Q9Y6A2 500 aa16.5■□□□□ 0.23
GYPC-204ENST00000459787 FRMPD4Q14CM0 1322 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 ALPK3Q96L96 1907 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 hCG_1642624A0A1W2PR95 340 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 RGS20O76081 388 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 MYL3P08590 195 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 RAG1P15918 1043 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 ARHGAP1Q07960 439 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 GNPTABQ3T906 1256 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 FAM126BQ8IXS8 530 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 COPS5Q92905 334 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 BADQ92934 168 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 TBX21Q9UL17 535 aa16.49■□□□□ 0.23
GYPC-204ENST00000459787 GRIN2DO15399 1336 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 TIMP1P01033 207 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 ADD1P35611 737 aaKnown RBP16.48■□□□□ 0.23
GYPC-204ENST00000459787 PCNX4Q63HM2 1172 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 PPP1R18Q6NYC8 613 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
GYPC-204ENST00000459787 IL31RAQ8NI17 732 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 AFG1LQ8WV93 481 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 GLT8D2Q9H1C3 349 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 LCTP09848 1927 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 LAMA3Q16787 3333 aa16.48■□□□□ 0.23
GYPC-204ENST00000459787 CNTNAP5Q8WYK1 1306 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 SLC34A2O95436 690 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 CD4P01730 458 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 SUPT20HL2P0C7V6 817 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 CDC27P30260 824 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 DGKDQ16760 1214 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 LRIT3Q3SXY7 679 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 CELF3Q5SZQ8 465 aaKnown RBP16.47■□□□□ 0.23
GYPC-204ENST00000459787 WWC2Q6AWC2 1192 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 PPTC7Q8NI37 304 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
GYPC-204ENST00000459787 BARHL2Q9NY43 387 aa16.47■□□□□ 0.23
GYPC-204ENST00000459787 SPDYE3A6NKU9 549 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 PPFIA4O75335 1185 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 MMP3P08254 477 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 ICAM3P32942 547 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 NAPAP54920 295 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 ANAPC15P60006 121 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 PSMC6P62333 389 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
GYPC-204ENST00000459787 PTPN11Q06124 597 aaPredicted RBP16.46■□□□□ 0.23
GYPC-204ENST00000459787 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 NFRKBQ6P4R8 1299 aa16.46■□□□□ 0.23
GYPC-204ENST00000459787 GPKOWQ92917 476 aaPredicted RBP eCLIP16.46■□□□□ 0.23
GYPC-204ENST00000459787 ALDH8A1Q9H2A2 487 aaPredicted RBP16.46■□□□□ 0.23
GYPC-204ENST00000459787 LRRC37A2A6NM11 1700 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 FIBPO43427 364 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 FOSP01100 380 aaPredicted RBP16.45■□□□□ 0.22
GYPC-204ENST00000459787 ITGB8P26012 769 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
GYPC-204ENST00000459787 NEDD9Q14511 834 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 PFKFB3Q16875 520 aaPredicted RBP16.45■□□□□ 0.22
GYPC-204ENST00000459787 MFSD5Q6N075 450 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 ZNF274Q96GC6 653 aaPredicted RBP16.45■□□□□ 0.22
GYPC-204ENST00000459787 CDHR1Q96JP9 859 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 SPATA33Q96N06 139 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 TRPV6Q9H1D0 765 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 NID2Q14112 1375 aa16.45■□□□□ 0.22
GYPC-204ENST00000459787 STXBP3O00186 592 aa16.44■□□□□ 0.22
GYPC-204ENST00000459787 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
GYPC-204ENST00000459787 GGPS1O95749 300 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms