RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	RARB	P10826	455 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	MYCL	P12524	364 aa	Predicted RBP	11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	NKX3-2	P78367	333 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	STXBP2	Q15833	593 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	DUSP28	Q4G0W2	176 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	JAKMIP3	Q5VZ66	844 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	SEPT14	Q6ZU15	432 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	TRIM22	Q8IYM9	498 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	CRYGN	Q8WXF5	182 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	ANO3	Q9BYT9	981 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	WDR11	Q9BZH6	1224 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	ORC3	Q9UBD5	711 aa	Predicted RBP	11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	KCNJ14	Q9UNX9	436 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	TELO2	Q9Y4R8	837 aa		11.78	□□□□□ -0.52
MRPL55-223	ENST00000459783	EIF3J	O75822	258 aa	Known RBP	11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	ITGB5	P18084	799 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	CCND2	P30279	289 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	MRPL12	P52815	198 aa	Known RBP	11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	GJA9	P57773	515 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	BEX3	Q00994	111 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	AKAP17A	Q02040	695 aa	Known RBP	11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	SP2	Q02086	613 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	ARHGAP1	Q07960	439 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	LY6K	Q17RY6	165 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	PCNX4	Q63HM2	1172 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	IQSEC1	Q6DN90	963 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	TLK2	Q86UE8	772 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	ANKLE1	Q8NAG6	615 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	SCFD2	Q8WU76	684 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	TMX3	Q96JJ7	454 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	INPP4A	Q96PE3	977 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	PHF20	Q9BVI0	1012 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	SH3GLB2	Q9NR46	395 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	RTEL1	Q9NZ71	1219 aa		11.77	□□□□□ -0.53
MRPL55-223	ENST00000459783	DNM1L	O00429	736 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	DYNC1LI2	O43237	492 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	CDKL5	O76039	1030 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	TXN	P10599	105 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	CST5	P28325	142 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	CPLX2	Q6PUV4	134 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	DAGLB	Q8NCG7	672 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	CYP2W1	Q8TAV3	490 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	OXER1	Q8TDS5	423 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	C6orf50	Q9HD87	102 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	DDX41	Q9UJV9	622 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	PHF24	Q9UPV7	400 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	UBIAD1	Q9Y5Z9	338 aa		11.76	□□□□□ -0.53
MRPL55-223	ENST00000459783	FAM205C	A6NFA0	338 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	ST18	O60284	1047 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	SORBS3	O60504	671 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	MYCN	P04198	464 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	C6orf222	P0C671	652 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	UBA1	P22314	1058 aa	Known RBP	11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	ICAM3	P32942	547 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	SREBF1	P36956	1147 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	FOSB	P53539	338 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	NLRP5	P59047	1200 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	AP3B2	Q13367	1082 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	KCNA10	Q16322	511 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	EARS2	Q5JPH6	523 aa	Known RBP	11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	REXO1	Q8N1G1	1221 aa	Known RBP	11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	CCDC148	Q8NFR7	591 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	FERMT2	Q96AC1	680 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	ALG1	Q9BT22	464 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	PCDHA4	Q9UN74	947 aa		11.75	□□□□□ -0.53
MRPL55-223	ENST00000459783	IGLV3-22	A0A075B6J6	115 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	SPDYE3	A6NKU9	549 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783		B4DLN1	442 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	SPATA31C2	B4DYI2	1134 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	FAM86B1	E9PN63	330 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	ATP9A	O75110	1047 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	FOS	P01100	380 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	FAM86B2	P0C5J1	330 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	ARHGAP4	P98171	946 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	TTLL4	Q14679	1199 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	FSCN1	Q16658	493 aa	Known RBP	11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	LRRC26	Q2I0M4	334 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	NECAB2	Q7Z6G3	386 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	TEX2	Q8IWB9	1127 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	BLID	Q8IZY5	108 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	ARRDC4	Q8NCT1	418 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	TNFRSF25	Q93038	417 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	MPHOSPH6	Q99547	160 aa	Known RBP	11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	C11orf49	Q9H6J7	331 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783		Q9Y3F1	56 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	MRVI1	Q9Y6F6	885 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783	PDE4DIP	Q5VU43	2346 aa		11.74	□□□□□ -0.53
MRPL55-223	ENST00000459783		A0A1W2PQ45	241 aa	Predicted RBP	11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783		A0A1W2PQY0	241 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783		A6NJR5	290 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	GRIN2D	O15399	1336 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	ASGR1	P07306	291 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	CYP3A4	P08684	503 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	AR	P10275	920 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	KCNA2	P16389	499 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	CAPN2	P17655	700 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	GNA11	P29992	359 aa		11.73	□□□□□ -0.53

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