RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SEC24BO95487 1268 aa23.85■■□□□ 1.41
VARS-218ENST00000459667 CCT2P78371 535 aaKnown RBP23.85■■□□□ 1.41
VARS-218ENST00000459667 LY6KQ17RY6 165 aa23.85■■□□□ 1.41
VARS-218ENST00000459667 BRDTQ58F21 947 aaPredicted RBP23.85■■□□□ 1.41
VARS-218ENST00000459667 PRKAG2Q9UGJ0 569 aa23.85■■□□□ 1.41
VARS-218ENST00000459667 COLQQ9Y215 455 aaPredicted RBP23.85■■□□□ 1.41
VARS-218ENST00000459667 MRVI1Q9Y6F6 885 aa23.85■■□□□ 1.41
VARS-218ENST00000459667 DNAH12Q6ZR08 3092 aa23.84■■□□□ 1.41
VARS-218ENST00000459667 PQBP1O60828 265 aaKnown RBP23.84■■□□□ 1.41
VARS-218ENST00000459667 RGS20O76081 388 aa23.84■■□□□ 1.41
VARS-218ENST00000459667 TLE2Q04725 743 aa23.84■■□□□ 1.41
VARS-218ENST00000459667 UBE2SQ16763 222 aa23.84■■□□□ 1.41
VARS-218ENST00000459667 TYW1BQ6NUM6 668 aa23.84■■□□□ 1.41
VARS-218ENST00000459667 ZFP91Q96JP5 570 aaPredicted RBP23.84■■□□□ 1.41
VARS-218ENST00000459667 LARP6Q9BRS8 491 aaKnown RBP23.84■■□□□ 1.41
VARS-218ENST00000459667 NCOA5Q9HCD5 579 aaKnown RBP23.84■■□□□ 1.41
VARS-218ENST00000459667 BARHL2Q9NY43 387 aa23.84■■□□□ 1.41
VARS-218ENST00000459667 RBM27Q9P2N5 1060 aaKnown RBP23.84■■□□□ 1.41
VARS-218ENST00000459667 STXBP3O00186 592 aa23.83■■□□□ 1.41
VARS-218ENST00000459667 GH1P01241 217 aa23.83■■□□□ 1.41
VARS-218ENST00000459667 PFKFB3Q16875 520 aaPredicted RBP23.83■■□□□ 1.41
VARS-218ENST00000459667 PRDM5Q9NQX1 630 aaPredicted RBP23.83■■□□□ 1.41
VARS-218ENST00000459667 PDLIM7Q9NR12 457 aa23.83■■□□□ 1.41
VARS-218ENST00000459667 POLR3EQ9NVU0 708 aa23.83■■□□□ 1.41
VARS-218ENST00000459667 PCDH10Q9P2E7 1040 aa23.83■■□□□ 1.41
VARS-218ENST00000459667 DDX41Q9UJV9 622 aaKnown RBP23.83■■□□□ 1.41
VARS-218ENST00000459667 PRPF3O43395 683 aaKnown RBP23.82■■□□□ 1.4
VARS-218ENST00000459667 MYL3P08590 195 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 SCG2P13521 617 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 AKAP17AQ02040 695 aaKnown RBP23.82■■□□□ 1.4
VARS-218ENST00000459667 NTRK3Q16288 839 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 C8orf34Q49A92 452 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 KCNV1Q6PIU1 500 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 PHKBQ93100 1093 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 IL17RAQ96F46 866 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 ZNF274Q96GC6 653 aaPredicted RBP23.82■■□□□ 1.4
VARS-218ENST00000459667 RIC8AQ9NPQ8 531 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 MROH7Q68CQ1 1323 aa23.82■■□□□ 1.4
VARS-218ENST00000459667 A6NJR5 290 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 SPDYE3A6NKU9 549 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 ARVCFO00192 962 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 STAM2O75886 525 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 IFNAR1P17181 557 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 MAGEA10P43363 369 aaPredicted RBP23.81■■□□□ 1.4
VARS-218ENST00000459667 ADCY7P51828 1080 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 MRPS9P82933 396 aaKnown RBP23.81■■□□□ 1.4
VARS-218ENST00000459667 ARHGAP1Q07960 439 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 PCNX4Q63HM2 1172 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 ANKRD33Q7Z3H0 272 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 TOX2Q96NM4 488 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 RNF26Q9BY78 433 aaPredicted RBP23.81■■□□□ 1.4
VARS-218ENST00000459667 GTF3C3Q9Y5Q9 886 aa23.81■■□□□ 1.4
VARS-218ENST00000459667 SMCO2A6NFE2 343 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 DCDC2CA8MYV0 355 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 CLTBP09497 229 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 CDK7P50613 346 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 PURAQ00577 322 aaKnown RBP23.8■■□□□ 1.4
VARS-218ENST00000459667 STK3Q13188 491 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 GNPTABQ3T906 1256 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 XRRA1Q6P2D8 792 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 TEX2Q8IWB9 1127 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 INPP4AQ96PE3 977 aaPredicted RBP23.8■■□□□ 1.4
VARS-218ENST00000459667 GDF15Q99988 308 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 SLC26A6Q9BXS9 759 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 PRO3102Q9H379 93 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 PCDHA6Q9UN73 950 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 PCDHA8Q9Y5H6 950 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 LTBP2Q14767 1821 aa23.8■■□□□ 1.4
VARS-218ENST00000459667 CPLX1O14810 134 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 PSMC6P62333 389 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 ITGA7Q13683 1181 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 PKN1Q16512 942 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 SH3RF1Q7Z6J0 888 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 AFG1LQ8WV93 481 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 MTG1Q9BT17 334 aaPredicted RBP23.79■■□□□ 1.4
VARS-218ENST00000459667 GLT8D2Q9H1C3 349 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 ALDH8A1Q9H2A2 487 aaPredicted RBP23.79■■□□□ 1.4
VARS-218ENST00000459667 EHMT1Q9H9B1 1298 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 RTEL1Q9NZ71 1219 aa23.79■■□□□ 1.4
VARS-218ENST00000459667 KPNA6O60684 536 aa23.78■■□□□ 1.4
VARS-218ENST00000459667 MMP3P08254 477 aa23.78■■□□□ 1.4
VARS-218ENST00000459667 TGFB3P10600 412 aa23.78■■□□□ 1.4
VARS-218ENST00000459667 UBA1P22314 1058 aaKnown RBP23.78■■□□□ 1.4
VARS-218ENST00000459667 AK2P54819 239 aa23.78■■□□□ 1.4
VARS-218ENST00000459667 MDM2Q00987 491 aaPredicted RBP23.78■■□□□ 1.4
VARS-218ENST00000459667 ANKRD1Q15327 319 aa23.78■■□□□ 1.4
VARS-218ENST00000459667 HABP4Q5JVS0 413 aaKnown RBP23.78■■□□□ 1.4
VARS-218ENST00000459667 DHX37Q8IY37 1157 aaKnown RBP23.78■■□□□ 1.4
VARS-218ENST00000459667 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
VARS-218ENST00000459667 CCDC12Q8WUD4 166 aaPredicted RBP23.78■■□□□ 1.4
VARS-218ENST00000459667 EMID1Q96A84 441 aaPredicted RBP23.78■■□□□ 1.4
VARS-218ENST00000459667 MYH7BA7E2Y1 1941 aa23.78■■□□□ 1.4
VARS-218ENST00000459667 TRIM43BA6NCK2 446 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 GGPS1O95749 300 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 ICAM3P32942 547 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 FAAP100Q0VG06 881 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 LAMC2Q13753 1193 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 TRIM22Q8IYM9 498 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 TRIM43Q96BQ3 446 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms