RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
HDLBP-227ENST00000458564 C1QTNF1Q9BXJ1 281 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 UBA5Q9GZZ9 404 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 CPVLQ9H3G5 476 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 CERS4Q9HA82 394 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 GTF2IRD1Q9UHL9 959 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 ZNF213O14771 459 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 F2P00734 622 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 HOXD8P13378 290 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-227ENST00000458564 GRB10Q13322 594 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 DGKDQ16760 1214 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 CNKSR3Q6P9H4 555 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 SEPT14Q6ZU15 432 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 ADGRF4Q8IZF3 695 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 PPTC7Q8NI37 304 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 TBC1D5Q92609 795 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 ZKSCAN3Q9BRR0 538 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 KATNAL1Q9BW62 490 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 LMCD1Q9NZU5 365 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 DDX41Q9UJV9 622 aaKnown RBP12.19□□□□□ -0.46
HDLBP-227ENST00000458564 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
HDLBP-227ENST00000458564 BRWD1Q9NSI6 2320 aa12.19□□□□□ -0.46
HDLBP-227ENST00000458564 PTPRSQ13332 1948 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 ABHD14A-ACY1A0A1B0GW23 586 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 HAS3O00219 553 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 NBNO60934 754 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 EFCAB14O75071 495 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 KDM4AO75164 1064 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 EIF3JO75822 258 aaKnown RBP12.18□□□□□ -0.46
HDLBP-227ENST00000458564 GJB5O95377 273 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 CKBP12277 381 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 SDSP20132 328 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 PLA2G5P39877 138 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 KRT40Q6A162 431 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 ENAHQ8N8S7 591 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-227ENST00000458564 HLA-CQ95604 372 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 ZSCAN10Q96SZ4 725 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-227ENST00000458564 OSBPL3Q9H4L5 887 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 PXMP2Q9NR77 195 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 RAPGEFL1Q9UHV5 662 aa12.18□□□□□ -0.46
HDLBP-227ENST00000458564 COL4A4P53420 1690 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-227ENST00000458564 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 LCHNA4D1U4 455 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 OPLAHO14841 1288 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 NR3C2P08235 984 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 PSEN2P49810 448 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 HSD17B4P51659 736 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 DEFB103AP81534 67 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 PTK7Q13308 1070 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 AAMPQ13685 434 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 LAMC2Q13753 1193 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 TRIM71Q2Q1W2 868 aaKnown RBP12.17□□□□□ -0.46
HDLBP-227ENST00000458564 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 SMC5Q8IY18 1101 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 C7orf31Q8N865 590 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 RILPL2Q969X0 211 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 CRBNQ96SW2 442 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 RAD9AQ99638 391 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 DSCC1Q9BVC3 393 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 LNPKQ9C0E8 428 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 MAP3K20Q9NYL2 800 aaKnown RBP12.17□□□□□ -0.46
HDLBP-227ENST00000458564 HDAC6Q9UBN7 1215 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 MRVI1Q9Y6F6 885 aa12.17□□□□□ -0.46
HDLBP-227ENST00000458564 TRIP12Q14669 1992 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-227ENST00000458564 TCF20Q9UGU0 1960 aaKnown RBP12.17□□□□□ -0.46
HDLBP-227ENST00000458564 B4E1Z4 1266 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
HDLBP-227ENST00000458564 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
HDLBP-227ENST00000458564 CHMP4BP1P59074 171 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 ERVK-21P61565 698 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-227ENST00000458564 MFSD10Q14728 455 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 KIAA0753Q2KHM9 967 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 KCNV1Q6PIU1 500 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 CHST3Q7LGC8 479 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 SAMD3Q8N6K7 520 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 MTMR8Q96EF0 704 aa12.16□□□□□ -0.46
HDLBP-227ENST00000458564 ARIH1Q9Y4X5 557 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-227ENST00000458564 EMSYQ7Z589 1322 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 HIP1O00291 1037 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 PPFIA4O75335 1185 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 RGS20O76081 388 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 ZNF286BP0CG31 522 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 MBTPS1Q14703 1052 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.46
HDLBP-227ENST00000458564 TCTN1Q2MV58 587 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 STOX1Q6ZVD7 989 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 TMCO2Q7Z6W1 182 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-227ENST00000458564 PLEKHM2Q8IWE5 1019 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 GDPD5Q8WTR4 605 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms