RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 GCOM1H8Y6P7 765 aaPredicted RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 NEMFO60524 1076 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 ZBED4O75132 1171 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 ZNF202O95125 648 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 OR52Z1P0C646 297 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 POLR2MP0CAP2 368 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 PTMSP20962 102 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 HOXA7P31268 230 aaPredicted RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 HERVK_113P62684 666 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 RPS6P62753 249 aaKnown RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 E2F4Q16254 413 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 ECM1Q16610 540 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 NAALADL2Q58DX5 795 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 PDILTQ8N807 584 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 PROCA1Q8NCQ7 364 aaPredicted RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 ETNPPLQ8TBG4 499 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 RBM46Q8TBY0 533 aaKnown RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 SLC10A4Q96EP9 437 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 PNMA5Q96PV4 448 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 PLIN2Q99541 437 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 PAGR1Q9BTK6 254 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 BCAS3Q9H6U6 928 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 MRPL11Q9Y3B7 192 aaKnown RBP9.92□□□□□ -0.82
RIF1-208ENST00000457745 KIAA1217Q5T5P2 1943 aa9.92□□□□□ -0.82
RIF1-208ENST00000457745 CYP3A7-CYP3A51PA0A087WV96 503 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 CCL15-CCL14A0A0B4J2E2 113 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 IGF2BP3O00425 579 aaKnown RBP eCLIP9.91□□□□□ -0.82
RIF1-208ENST00000457745 ATP2A1O14983 1001 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 ARP10275 920 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 ITGB5P18084 799 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 EIF2AK2P19525 551 aaKnown RBP9.91□□□□□ -0.82
RIF1-208ENST00000457745 CYP3A7P24462 503 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 CIITAP33076 1130 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 MRPS9P82933 396 aaKnown RBP9.91□□□□□ -0.82
RIF1-208ENST00000457745 CNTN2Q02246 1040 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 SPIRE1Q08AE8 756 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 SEMA3FQ13275 785 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 AP3B2Q13367 1082 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
RIF1-208ENST00000457745 CCL15Q16663 113 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 NSMFQ6X4W1 530 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 KCNK18Q7Z418 384 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 STAMQ92783 540 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 MOV10L1Q9BXT6 1211 aaKnown RBP9.91□□□□□ -0.82
RIF1-208ENST00000457745 KCNMB3Q9NPA1 279 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 DDX25Q9UHL0 483 aaKnown RBP9.91□□□□□ -0.82
RIF1-208ENST00000457745 KCNH3Q9ULD8 1083 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 MCM3APO60318 1980 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 PLXNB2O15031 1838 aa9.91□□□□□ -0.82
RIF1-208ENST00000457745 ZNFX1Q9P2E3 1918 aaKnown RBP9.9□□□□□ -0.82
RIF1-208ENST00000457745 MYPNQ86TC9 1320 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 ADGRA2Q96PE1 1338 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 GOLGA6L4A6NEF3 574 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 FAM155AB1AL88 458 aaPredicted RBP9.9□□□□□ -0.82
RIF1-208ENST00000457745 EML1O00423 815 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 MSH4O15457 936 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 POLR2DO15514 142 aaKnown RBP9.9□□□□□ -0.82
RIF1-208ENST00000457745 PPP1R37O75864 691 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 RGS20O76081 388 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 CYP3A4P08684 503 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 PTGS1P23219 599 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 TECP42680 631 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 TXKP42681 527 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 HUNKP57058 714 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 MDM2Q00987 491 aaPredicted RBP9.9□□□□□ -0.82
RIF1-208ENST00000457745 GRB10Q13322 594 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 SNAPC2Q13487 334 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 PNOCQ13519 176 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 PLS1Q14651 629 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 CALCRLQ16602 461 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 PRR16Q569H4 304 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 PPP4R3AQ6IN85 833 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 PDXDC2PQ6P474 469 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 CCDC73Q6ZRK6 1079 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 C11orf57Q6ZUT1 292 aaPredicted RBP9.9□□□□□ -0.82
RIF1-208ENST00000457745 DHX58Q96C10 678 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 PORCNQ9H237 461 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 DDX19AQ9NUU7 478 aaKnown RBP9.9□□□□□ -0.82
RIF1-208ENST00000457745 VAV3Q9UKW4 847 aa9.9□□□□□ -0.82
RIF1-208ENST00000457745 SOWAHBA6NEL2 793 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 PDHXO00330 501 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 BMP6P22004 513 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 PRPHP41219 470 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 SYKP43405 635 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 OAZ1P54368 228 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 FKBP1BP68106 108 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 IRX3P78415 501 aaPredicted RBP9.89□□□□□ -0.83
RIF1-208ENST00000457745 LRSAM1Q6UWE0 723 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 KRBA2Q6ZNG9 492 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 RNF207Q6ZRF8 634 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 SH3RF1Q7Z6J0 888 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 SAPCD2Q86UD0 394 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 RIOX2Q8IUF8 465 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 C2orf69Q8N8R5 385 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms