RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SNHG28P0DPA3 235 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 SOGA3Q5TF21 947 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 TTC19Q6DKK2 380 aaPredicted RBP13.85□□□□□ -0.19
LINC00959-201ENST00000456581 KRT26Q7Z3Y9 468 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 RRP15Q9Y3B9 282 aaKnown RBP13.85□□□□□ -0.19
LINC00959-201ENST00000456581 NONOQ15233 471 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00959-201ENST00000456581 CCDC122Q5T0U0 273 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 SIAH1Q8IUQ4 282 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 CDAN1Q8IWY9 1227 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 REXO1Q8N1G1 1221 aaKnown RBP13.85□□□□□ -0.19
LINC00959-201ENST00000456581 EHD2Q9NZN4 543 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 SIPA1L1O43166 1804 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 LRRC10BA6NIK2 292 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 RASSF10A6NK89 507 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 ACTN2P35609 894 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 TECP42680 631 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 NT5C2P49902 561 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 GPS2Q13227 327 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 CERKLQ49MI3 558 aaPredicted RBP13.84□□□□□ -0.19
LINC00959-201ENST00000456581 TRIM47Q96LD4 638 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.84□□□□□ -0.19
LINC00959-201ENST00000456581 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 ITIH6Q6UXX5 1313 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 TCP10L2B9ZVM9 353 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 TDP2O95551 362 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 FCER1AP12319 257 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 ARL6IP4Q66PJ3 421 aaKnown RBP13.84□□□□□ -0.19
LINC00959-201ENST00000456581 LRRC31Q6UY01 552 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 SRLQ86TD4 932 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 HDAC7Q8WUI4 952 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 EXOC4Q96A65 974 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 FAM204AQ9H8W3 233 aa13.84□□□□□ -0.19
LINC00959-201ENST00000456581 SLC37A4O43826 429 aa13.83□□□□□ -0.19
LINC00959-201ENST00000456581 SYF2O95926 243 aaKnown RBP13.83□□□□□ -0.19
LINC00959-201ENST00000456581 FECHP22830 423 aa13.83□□□□□ -0.19
LINC00959-201ENST00000456581 C2orf54Q08AI8 447 aa13.83□□□□□ -0.19
LINC00959-201ENST00000456581 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.19
LINC00959-201ENST00000456581 MUM1L1Q5H9M0 696 aa13.83□□□□□ -0.19
LINC00959-201ENST00000456581 DPEP1P16444 411 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 GNA11P29992 359 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 LONP1P36776 959 aaKnown RBP13.83□□□□□ -0.2
LINC00959-201ENST00000456581 UBA7P41226 1012 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 TNNI2P48788 182 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 NEK8Q86SG6 692 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 ADSSL1Q8N142 457 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 HNRNPLLQ8WVV9 542 aaKnown RBP13.83□□□□□ -0.2
LINC00959-201ENST00000456581 DISC1Q9NRI5 854 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
LINC00959-201ENST00000456581 KLRC4O43908 158 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 TXKP42681 527 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 GALNT17Q6IS24 598 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 TRAPPC11Q7Z392 1133 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 SPICE1Q8N0Z3 855 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 PCMTD1Q96MG8 357 aaPredicted RBP13.82□□□□□ -0.2
LINC00959-201ENST00000456581 LUC7L2Q9Y383 392 aaKnown RBP13.82□□□□□ -0.2
LINC00959-201ENST00000456581 COL4A5P29400 1685 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L15C9J2P7 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L13C9JLJ4 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L11C9JVI0 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L18D6R9N7 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L22D6RA61 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L17D6RBQ6 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L19D6RCP7 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L20D6RJB6 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 BAG6P46379 1132 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L24Q0WX57 530 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 USP17L6PQ6QN14 398 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 KRT25Q7Z3Z0 450 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 OR8K1Q8NGG5 319 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 CCDC51Q96ER9 411 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 IDI2Q9BXS1 227 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 PSMD14O00487 310 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 EPHB6O15197 1021 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 ERLIN1O75477 346 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 OR52Z1P0C646 297 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 TRIM21P19474 475 aaKnown RBP13.82□□□□□ -0.2
LINC00959-201ENST00000456581 CXCR5P32302 372 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 MATR3P43243 847 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC00959-201ENST00000456581 ADCY7P51828 1080 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 STK4Q13043 487 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 KIAA1328Q86T90 577 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 SERPINA10Q9UK55 444 aa13.82□□□□□ -0.2
LINC00959-201ENST00000456581 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 ZNF263O14978 683 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 ZNF646O15015 1829 aaPredicted RBP13.81□□□□□ -0.2
LINC00959-201ENST00000456581 GH2P01242 217 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 PLCG1P19174 1290 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 KCNA3P22001 575 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 SLC1A4P43007 532 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 TTLL6Q8N841 843 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 ANKRD20A12PQ8NF67 263 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 GOLGA5Q8TBA6 731 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 ZNF507Q8TCN5 953 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 CSRNP1Q96S65 589 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 ZC3H4Q9UPT8 1303 aaKnown RBP13.81□□□□□ -0.2
LINC00959-201ENST00000456581 PNMA6FA0A0J9YX94 578 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms