RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 USP17L4A6NCW7 530 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 AGPSO00116 658 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 AKAP17AQ02040 695 aaKnown RBP8.46□□□□□ -1.05
HDAC9-218ENST00000456174 STIM1Q13586 685 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 WHAMMP3Q1A5X7 153 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC178Q5BJE1 867 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 USP17L1Q7RTZ2 530 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 ARHGAP22Q7Z5H3 698 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 DGKHQ86XP1 1220 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC170Q8IYT3 715 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 EPAS1Q99814 870 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 RNF26Q9BY78 433 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-218ENST00000456174 TSGA10Q9BZW7 698 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 TCP11L1Q9NUJ3 509 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 USP40Q9NVE5 1235 aa8.46□□□□□ -1.05
HDAC9-218ENST00000456174 SRRM3A6NNA2 597 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-218ENST00000456174 NDUFAB1O14561 156 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 CBFA2T2O43439 604 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 MGRN1O60291 552 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 OPA1O60313 960 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 PLEKHA8P1O95397 391 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 CRKP46108 304 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 PAPOLAP51003 745 aaKnown RBP8.46□□□□□ -1.06
HDAC9-218ENST00000456174 FKBP1AP62942 108 aaKnown RBP8.46□□□□□ -1.06
HDAC9-218ENST00000456174 FUT2Q10981 343 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 DACT2Q5SW24 774 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 CCDC181Q5TID7 509 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 C6orf89Q6UWU4 347 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 MYLK4Q86YV6 388 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-218ENST00000456174 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 CCAR1Q8IX12 1150 aaKnown RBP8.46□□□□□ -1.06
HDAC9-218ENST00000456174 ANKS1AQ92625 1134 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 SPAG5Q96R06 1193 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 LZTS2Q9BRK4 669 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 RNF39Q9H2S5 420 aa8.46□□□□□ -1.06
HDAC9-218ENST00000456174 RANBP17Q9H2T7 1088 aaKnown RBP8.46□□□□□ -1.06
HDAC9-218ENST00000456174 PUF60Q9UHX1 559 aaKnown RBP8.46□□□□□ -1.06
HDAC9-218ENST00000456174 SPDYE2BA6NHP3 402 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 A6NHS1 94 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 GOLGA8KD6RF30 607 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 PPIP5K2O43314 1243 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 PRPF3O43395 683 aaKnown RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 PPP1R12BO60237 982 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 STX10O60499 249 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 MMP1P03956 469 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 SPDYE6P0CI01 402 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 DPEP1P16444 411 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 GGCXP38435 758 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 FANCCQ00597 558 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 NCAPHQ15003 741 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 SPDYE2Q495Y8 402 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 APOBEC3HQ6NTF7 200 aaKnown RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CDC42EP5Q6NZY7 148 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 TMTC3Q6ZXV5 915 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 VSTM4Q8IW00 320 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 ENGASEQ8NFI3 743 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 RASSF8Q8NHQ8 419 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CENPHQ9H3R5 247 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 ZSWIM4Q9H7M6 989 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 DDX4Q9NQI0 724 aaKnown RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 POLR3EQ9NVU0 708 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CLIC4Q9Y696 253 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 BAZ2BQ9UIF8 2168 aaKnown RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CTAGE15A4D2H0 777 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 OATP04181 439 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 RHOXF2BP0C7M4 288 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CTAGE8P0CG41 777 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 KCNA3P22001 575 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 TPP2P29144 1249 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 RANBP1P43487 201 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 ME1P48163 572 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 SFSWAPQ12872 951 aaKnown RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 RASA3Q14644 834 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 STK38Q15208 465 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 SAFBQ15424 915 aaKnown RBP eCLIP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CRELD2Q6UXH1 353 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CTAGE6Q86UF2 777 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 APLFQ8IW19 511 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 CTAGE4Q8IX94 777 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 RTKN2Q8IZC4 609 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 LINC00301Q8NCQ3 95 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 PNMA1Q8ND90 353 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 ZDHHC15Q96MV8 337 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 RHOXF2Q9BQY4 288 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 MRIQ9BWK5 157 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 KCNJ14Q9UNX9 436 aa8.45□□□□□ -1.06
HDAC9-218ENST00000456174 V9GY48 417 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-218ENST00000456174 hCG_1642624A0A1W2PR95 340 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 BTBD18B2RXH4 712 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 IKBKBO14920 756 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 MYO1BO43795 1136 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 RNF8O76064 485 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 YEATS4O95619 227 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 MYL1P05976 194 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 RPSAP08865 295 aaKnown RBP8.44□□□□□ -1.06
HDAC9-218ENST00000456174 EPB41P11171 864 aaKnown RBP8.44□□□□□ -1.06
HDAC9-218ENST00000456174 KIF5BP33176 963 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 NUBP1P53384 320 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms